RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TBC1D10BQ4KMP7 808 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 CC2D2BQ6DHV5 1058 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 C11orf57Q6ZUT1 292 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 FCHSD1Q86WN1 690 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 MICALL2Q8IY33 904 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 SMARCC2Q8TAQ2 1214 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 DBF4Q9UBU7 674 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 ZBTB12Q9Y330 459 aaPredicted RBP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.99□□□□□ -0.974e-11■■□□□ 12.6
CPSF7-216ENST00000536548 LAMA2P24043 3122 aaKnown RBP8.99□□□□□ -0.97
CPSF7-216ENST00000536548 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 PRUNE2Q8WUY3 3088 aa8.99□□□□□ -0.97
CPSF7-216ENST00000536548 A0A1W2PQ27 194 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 A0A1W2PQ64 194 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 A0A1W2PQD8 194 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 PI4KAP2A4QPH2 592 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 GOLGA6L9A6NEM1 432 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 H7C1D1 291 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 PFKFB2O60825 505 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 DDX58O95786 925 aaKnown RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 NAA30Q147X3 362 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 CRY2Q49AN0 593 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 RBM26Q5T8P6 1007 aaKnown RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 MOB2Q70IA6 237 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 DHX40Q8IX18 779 aaKnown RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 TTC5Q8N0Z6 440 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 AOPEPQ8N6M6 819 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 PI4KAP1Q8N8J0 262 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 FSIP1Q8NA03 581 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 MRPS27Q92552 414 aaKnown RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 UBXN4Q92575 508 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 FAM227BQ96M60 508 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 COL25A1Q9BXS0 654 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 TMEM51Q9NW97 253 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 V9GYY5 206 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-216ENST00000536548 ABCC12Q96J65 1359 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 HEG1Q9ULI3 1381 aa8.98□□□□□ -0.97
CPSF7-216ENST00000536548 A0A0D9SFI3 127 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 USP27XA6NNY8 438 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 YDJCA8MPS7 323 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 PPEF1O14829 653 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 ZSCAN12O43309 604 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 FKTNO75072 461 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 EIF2S2P20042 333 aaKnown RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 GTF2E1P29083 439 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 MKRN3Q13064 507 aaKnown RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 STK3Q13188 491 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 KSR2Q6VAB6 950 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 REM2Q8IYK8 340 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 ENGASEQ8NFI3 743 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 PPP1R13BQ96KQ4 1090 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 TRMT1Q9NXH9 659 aaKnown RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 CWC15Q9P013 229 aaKnown RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 CHPF2Q9P2E5 772 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 TRIM17Q9Y577 477 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 USP16Q9Y5T5 823 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 UTYO14607 1347 aa8.97□□□□□ -0.97
CPSF7-216ENST00000536548 ASTN2O75129 1339 aaPredicted RBP8.97□□□□□ -0.97
CPSF7-216ENST00000536548 TCHHQ07283 1943 aa8.96□□□□□ -0.97
CPSF7-216ENST00000536548 TULP2O00295 520 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 JAK2O60674 1132 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 TAF5LO75529 589 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 SMC2O95347 1197 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 ME1P48163 572 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 ETF1P62495 437 aaKnown RBP8.96□□□□□ -0.98
CPSF7-216ENST00000536548 IRX5P78411 483 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-216ENST00000536548 TEFQ10587 303 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 HLFQ16534 295 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 ARHGAP29Q52LW3 1261 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 JAKMIP3Q5VZ66 844 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 ZNF790Q6PG37 636 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 CLEC4GQ6UXB4 293 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 Q6ZUG5 572 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 OTOP1Q7RTM1 612 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 TMC6Q7Z403 805 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 HOMER1Q86YM7 354 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 RGS22Q8NE09 1264 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 LINS1Q8NG48 757 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 RPGRQ92834 1020 aaKnown RBP8.96□□□□□ -0.98
CPSF7-216ENST00000536548 DCPSQ96C86 337 aaKnown RBP8.96□□□□□ -0.98
CPSF7-216ENST00000536548 SDF4Q9BRK5 362 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-216ENST00000536548 DNAI1Q9UI46 699 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 CDHR2Q9BYE9 1310 aa8.96□□□□□ -0.98
CPSF7-216ENST00000536548 PRAMEF22A3QJZ6 481 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ERICH4A6NGS2 130 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 EFCAB8A8MWE9 144 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 GRM8O00222 908 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 IKBKBO14920 756 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 SASH1O94885 1247 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 YEATS4O95619 227 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 PNMA6AP0CW24 399 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ATP5JP18859 108 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 HOXA10P31260 410 aaPredicted RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
CPSF7-216ENST00000536548 TM4SF4P48230 202 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 CLCN6P51797 869 aa8.95□□□□□ -0.98
CPSF7-216ENST00000536548 NLRP12P59046 1061 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms