RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PDE8BO95263 885 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 PDCP20941 246 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 TM4SF4P48230 202 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 BCAMP50895 628 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 NBPF12Q5TAG4 269 aaPredicted RBP13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 ERC1Q8IUD2 1116 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 RHPN1Q8TCX5 695 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 SSC5DA1L4H1 1573 aa13.59□□□□□ -0.23
CHRNB1-202ENST00000536404 GADD45BO75293 160 aaPredicted RBP13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 CCDC192P0DO97 292 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 RASA3Q14644 834 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 SPRYD7Q5W111 196 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 VPS37DQ86XT2 251 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 CLMNQ96JQ2 1002 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 TDRD3Q9H7E2 651 aaKnown RBP13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 YY1AP1Q9H869 796 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 ZNF70Q9UC06 446 aaPredicted RBP13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 PPP2R3BQ9Y5P8 575 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 COL1A1P02452 1464 aaPredicted RBP13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.24
CHRNB1-202ENST00000536404 SYT1P21579 422 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 AXDND1Q5T1B0 1012 aaPredicted RBP13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 PI4K2BQ8TCG2 481 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 SLC10A4Q96EP9 437 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 LSG1Q9H089 658 aaKnown RBP13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 SERPINA10Q9UK55 444 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 KIF3AQ9Y496 699 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 USP2O75604 605 aaPredicted RBP13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 FGFR2P21802 821 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 CRKP46108 304 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 AK2P54819 239 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 MAP3K11Q16584 847 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 SUPT20HL1Q3ZLR7 823 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 SPDYE2Q495Y8 402 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 CAVIN4Q5BKX8 364 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 RGS22Q8NE09 1264 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 CNPY2Q9Y2B0 182 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
CHRNB1-202ENST00000536404 EYA2O00167 538 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 PPP1R12BO60237 982 aaPredicted RBP13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 PSMA5P28066 241 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 PDCL2Q8N4E4 241 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 KCNB2Q92953 911 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 R3HDMLQ9H3Y0 253 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 PDRG1Q9NUG6 133 aa13.56□□□□□ -0.24
CHRNB1-202ENST00000536404 ELP1O95163 1332 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 TCP10L2B9ZVM9 353 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CLGNO14967 610 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CAVIN2O95810 425 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CBX1P83916 185 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 SREBF2Q12772 1141 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 PUM3Q15397 648 aaKnown RBP13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 ATG9AQ7Z3C6 839 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CTU1Q7Z7A3 348 aaKnown RBP13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CDAN1Q8IWY9 1227 aa13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
CHRNB1-202ENST00000536404 VGLL3A8MV65 326 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 IFIT1P09914 478 aaKnown RBP13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 RGS19P49795 217 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 KRT85P78386 507 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 CHAMP1Q96JM3 812 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 TIGD1Q96MW7 591 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 SIL1Q9H173 461 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 GDPD2Q9HCC8 539 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
CHRNB1-202ENST00000536404 GPR25O00155 361 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 SRGAP3O43295 1099 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 GJA5P36382 358 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 IREB2P48200 963 aaKnown RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 CACNB3P54284 484 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 MTX1Q13505 466 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 RUFY3Q7L099 469 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 PLCD3Q8N3E9 789 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 TBC1D22AQ8WUA7 517 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 EVI5LQ96CN4 794 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 TEPSINQ96N21 525 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 TMEM39BQ9GZU3 492 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 CALCOCO1Q9P1Z2 691 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 FIBPO43427 364 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 SLC5A1P13866 664 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 GJB2P29033 226 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 OS9Q13438 667 aaPredicted RBP13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
CHRNB1-202ENST00000536404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms