RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 STK36Q9NRP7 1315 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 GOLGA8BA8MQT2 603 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 AGPSO00116 658 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 TEX33O43247 280 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ACTN4O43707 911 aaKnown RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 KIF5CO60282 957 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ERVK-24P63145 666 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 RBL2Q08999 1139 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 NTRK3Q16288 839 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ZNF569Q5MCW4 686 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 TRAPPC11Q7Z392 1133 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 RIC3Q7Z5B4 369 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 VPS37DQ86XT2 251 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 NUTM2AQ8IVF1 878 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 PDILTQ8N807 584 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ZNF579Q8NAF0 562 aaKnown RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 NOA1Q8NC60 698 aaKnown RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 NKX2-3Q8TAU0 364 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 AFAP1L1Q8TED9 768 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 XAGE3Q8WTP9 111 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 KAT2BQ92831 832 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 AIFM3Q96NN9 605 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 NAPGQ99747 312 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 MYD88Q99836 296 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ALG1Q9BT22 464 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ACBD3Q9H3P7 528 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ZSWIM4Q9H7M6 989 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 SEC31BQ9NQW1 1179 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 SAMSN1Q9NSI8 373 aaKnown RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 FAM217BQ9NTX9 383 aaPredicted RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 SERTAD1Q9UHV2 236 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 TTF2Q9UNY4 1162 aaKnown RBP7.89□□□□□ -1.15
CPSF7-215ENST00000536145 AMOTL2Q9Y2J4 779 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ARFGEF2Q9Y6D5 1785 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 TJP1Q07157 1748 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 PKD1L3Q7Z443 1732 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 LRP6O75581 1613 aa7.89□□□□□ -1.15
CPSF7-215ENST00000536145 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 LOC102724159A0A0B4J2E5 919 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 TARSL2A2RTX5 802 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 CTAGE15A4D2H0 777 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 CTAGE9A4FU28 777 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 H7C1W4 665 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 GOLIM4O00461 696 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 EXOC5O00471 708 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 RNF40O75150 1001 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 ABL1P00519 1130 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 TFRCP02786 760 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 CTAGE8P0CG41 777 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 TOB1P50616 345 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 PIP4K2BP78356 416 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 POSTNQ15063 836 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 PWP2Q15269 919 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 DNAJC21Q5F1R6 531 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 SLC9C2Q5TAH2 1124 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 SPATA1Q5VX52 437 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 WWC2Q6AWC2 1192 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 KCNV1Q6PIU1 500 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 ZNF662Q6ZS27 426 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 UBE3BQ7Z3V4 1068 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 CTAGE6Q86UF2 777 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 CTAGE4Q8IX94 777 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 TRMT44Q8IYL2 757 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 XAGE2Q96GT9 111 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 NBPF3Q9H094 633 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 FAM107BQ9H098 131 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 FAM204AQ9H8W3 233 aa7.88□□□□□ -1.15
CPSF7-215ENST00000536145 REXO2Q9Y3B8 237 aaKnown RBP7.88□□□□□ -1.15
CPSF7-215ENST00000536145 MYO5AQ9Y4I1 1855 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 AFDNP55196 1824 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 LAMB4A4D0S4 1761 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 ABCC12Q96J65 1359 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 LRRC10BA6NIK2 292 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 RANBP6O60518 1105 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 CIAO1O76071 339 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 GYPCP04921 128 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 RHOXF2BP0C7M4 288 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 CD44P16070 742 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 FNTAP49354 379 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 FXR1P51114 621 aaKnown RBP eCLIP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 GRIN1Q05586 938 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 NEXNQ0ZGT2 675 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 AIMP1Q12904 312 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 SF3B2Q13435 895 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 KIF4BQ2VIQ3 1234 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 TTC39AQ5SRH9 613 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 PAPD7Q5XG87 772 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 COPS6Q7L5N1 327 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 TMTC1Q8IUR5 882 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 IGSF22Q8N9C0 903 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 KRI1Q8N9T8 703 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 ACRBPQ8NEB7 543 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 NCOA7Q8NI08 942 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 DRC1Q96MC2 740 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 CDC5LQ99459 802 aaKnown RBP7.87□□□□□ -1.15
CPSF7-215ENST00000536145 RHOXF2Q9BQY4 288 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 LZTFL1Q9NQ48 299 aa7.87□□□□□ -1.15
CPSF7-215ENST00000536145 A1CFQ9NQ94 594 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms