RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 CRNKL1Q9BZJ0 848 aaKnown RBP9.37□□□□□ -0.91
COL21A1-212ENST00000535941 FLT1P17948 1338 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 KLF18A0A0U1RQI7 1052 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 TROAPQ12815 778 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 DACT2Q5SW24 774 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 MCTP1Q6DN14 999 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 PDGFDQ9GZP0 370 aaPredicted RBP9.36□□□□□ -0.91
COL21A1-212ENST00000535941 DAGLAQ9Y4D2 1042 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 RLFQ13129 1914 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 DDAH1O94760 285 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 U2AF2P26368 475 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL21A1-212ENST00000535941 OLFM4Q6UX06 510 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 MPNDQ8N594 471 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 NCOA5Q9HCD5 579 aaKnown RBP9.36□□□□□ -0.91
COL21A1-212ENST00000535941 IL17RBQ9NRM6 502 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 AATFQ9NY61 560 aaKnown RBP eCLIP9.36□□□□□ -0.91
COL21A1-212ENST00000535941 OTOFQ9HC10 1997 aa9.36□□□□□ -0.91
COL21A1-212ENST00000535941 A0A0G2JMZ2 1700 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 MRE11P49959 708 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 KIAA2012Q0VF49 1180 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 VPS37DQ86XT2 251 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 C2CD5Q86YS7 1000 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 TMTC2Q8N394 836 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 ZSCAN10Q96SZ4 725 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 CNPY2Q9Y2B0 182 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 FAM237AA0A1B0GTK4 181 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 KDM4AO75164 1064 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 GADD45BO75293 160 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 MBD3O95983 291 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 FBXO18Q8NFZ0 1043 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 GMLQ99445 158 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 ABCF2Q9UG63 623 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 ATP6V1DQ9Y5K8 247 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 NASPP49321 788 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 UBE2HP62256 183 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 NPY5RQ15761 445 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 STRIP1Q5VSL9 837 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 APOBEC3HQ6NTF7 200 aaKnown RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 RALYLQ86SE5 291 aaKnown RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 CNKSR1Q969H4 720 aa9.35□□□□□ -0.91
COL21A1-212ENST00000535941 ZBED3Q96IU2 234 aaPredicted RBP9.35□□□□□ -0.91
COL21A1-212ENST00000535941 TNKSO95271 1327 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 GOLGA8BA8MQT2 603 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
COL21A1-212ENST00000535941 TDO2P48775 406 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 PKN1Q16512 942 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 GAS2L3Q86XJ1 694 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.34□□□□□ -0.91
COL21A1-212ENST00000535941 EHD4Q9H223 541 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 PRDM10Q9NQV6 1147 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 CNTNAP5Q8WYK1 1306 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 LTBP3Q9NS15 1303 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 CYP2D7A0A087X1C5 515 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 YDJCA8MPS7 323 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 LDHCP07864 332 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 CYP2D6P10635 497 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 BAG6P46379 1132 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 DNM1Q05193 864 aaKnown RBP9.34□□□□□ -0.91
COL21A1-212ENST00000535941 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 FAM177A1Q8N128 213 aaPredicted RBP9.34□□□□□ -0.91
COL21A1-212ENST00000535941 ESR2Q92731 530 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 MAP7D2Q96T17 732 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
COL21A1-212ENST00000535941 USP17L12C9JPN9 530 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 USP17L21D6R901 530 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 PLCG2P16885 1265 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 RASA1P20936 1047 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 BTDP43251 543 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 STK3Q13188 491 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 ZSCAN23Q3MJ62 389 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 EYA3Q99504 573 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 PGAP2Q9UHJ9 254 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 KIF28PB7ZC32 967 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 H0YIN7 160 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 M0R2N6 131 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 DHX16O60231 1041 aaKnown RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 KIF23Q02241 960 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 TRDNQ13061 729 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 MFSD14BQ5SR56 506 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 DGKHQ86XP1 1220 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 DZIP1Q86YF9 867 aaKnown RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 ZNF654Q8IZM8 581 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 PTPRFP10586 1907 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 BRD2P25440 801 aaKnown RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 METAP2P50579 478 aaKnown RBP eCLIP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 SLC35G1Q2M3R5 365 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 TMEM67Q5HYA8 995 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 MSL1Q68DK7 614 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 SLF2Q8IX21 1173 aa9.33□□□□□ -0.92
COL21A1-212ENST00000535941 CRACR2BQ8N4Y2 399 aaPredicted RBP9.33□□□□□ -0.92
COL21A1-212ENST00000535941 MTMR14Q8NCE2 650 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms