RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 STAP2Q9UGK3 403 aa26.79■■□□□ 1.88
VPS37C-202ENST00000535818 HERC5Q9UII4 1024 aaKnown RBP26.79■■□□□ 1.88
VPS37C-202ENST00000535818 PHF20L1A8MW92 1017 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 TRPA1O75762 1119 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 TM4SF4P48230 202 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 LBX1P52954 281 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 INHBEP58166 350 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 SCYL3Q8IZE3 742 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 PICK1Q9NRD5 415 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 RNF186Q9NXI6 227 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 SAGE1Q9NXZ1 904 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 NAV1Q8NEY1 1877 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 MYH1P12882 1939 aa26.78■■□□□ 1.88
VPS37C-202ENST00000535818 ZFYP08048 801 aaPredicted RBP26.77■■□□□ 1.88
VPS37C-202ENST00000535818 RNF113AO15541 343 aaKnown RBP26.76■■□□□ 1.87
VPS37C-202ENST00000535818 GTF2A2P52657 109 aa26.76■■□□□ 1.87
VPS37C-202ENST00000535818 PPATQ06203 517 aa26.76■■□□□ 1.87
VPS37C-202ENST00000535818 PPIL2Q13356 520 aa26.76■■□□□ 1.87
VPS37C-202ENST00000535818 LAMB1P07942 1786 aa26.76■■□□□ 1.87
VPS37C-202ENST00000535818 DOCK1Q14185 1865 aa26.75■■□□□ 1.87
VPS37C-202ENST00000535818 SIPA1L1O43166 1804 aa26.75■■□□□ 1.87
VPS37C-202ENST00000535818 CTNND1O60716 968 aaKnown RBP26.75■■□□□ 1.87
VPS37C-202ENST00000535818 TTC6Q86TZ1 520 aa26.75■■□□□ 1.87
VPS37C-202ENST00000535818 FOXP4Q8IVH2 680 aaPredicted RBP26.75■■□□□ 1.87
VPS37C-202ENST00000535818 SDR42E1Q8WUS8 393 aa26.75■■□□□ 1.87
VPS37C-202ENST00000535818 APPBP2Q92624 585 aa26.75■■□□□ 1.87
VPS37C-202ENST00000535818 PUS7LQ9H0K6 701 aaKnown RBP26.75■■□□□ 1.87
VPS37C-202ENST00000535818 POLR3DP05423 398 aaPredicted RBP26.74■■□□□ 1.87
VPS37C-202ENST00000535818 MCM9Q9NXL9 1143 aa26.74■■□□□ 1.87
VPS37C-202ENST00000535818 CCL15-CCL14A0A0B4J2E2 113 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 IRF6O14896 467 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 CCL15Q16663 113 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 OTUD7BQ6GQQ9 843 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 IFNL1Q8IU54 200 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 DDRGK1Q96HY6 314 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 PRDM10Q9NQV6 1147 aa26.73■■□□□ 1.87
VPS37C-202ENST00000535818 PRKAB2O43741 272 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 ALDH1A1P00352 501 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 SNAPC2Q13487 334 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 EVI5LQ96CN4 794 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 MS4A4AQ96JQ5 239 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 DCP1AQ9NPI6 582 aaPredicted RBP26.72■■□□□ 1.87
VPS37C-202ENST00000535818 ATP8A2Q9NTI2 1148 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 SLC4A4Q9Y6R1 1079 aa26.72■■□□□ 1.87
VPS37C-202ENST00000535818 DDX60LQ5H9U9 1706 aaKnown RBP26.72■■□□□ 1.87
VPS37C-202ENST00000535818 NEFLP07196 543 aa26.71■■□□□ 1.87
VPS37C-202ENST00000535818 PLEKHM2Q8IWE5 1019 aa26.71■■□□□ 1.87
VPS37C-202ENST00000535818 TRIM6-TRIM34B2RNG4 842 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 IGF2BP3O00425 579 aaKnown RBP eCLIP26.7■■□□□ 1.86
VPS37C-202ENST00000535818 CETPP11597 493 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 PTPRAP18433 802 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 CAP2P40123 477 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 AMOTL1Q8IY63 956 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 OSBP2Q969R2 916 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 EHD4Q9H223 541 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 DNAJC18Q9H819 358 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 SERPINB13Q9UIV8 391 aa26.7■■□□□ 1.86
VPS37C-202ENST00000535818 TESPA1A2RU30 521 aaPredicted RBP26.69■■□□□ 1.86
VPS37C-202ENST00000535818 METTL16Q86W50 562 aaKnown RBP26.69■■□□□ 1.86
VPS37C-202ENST00000535818 BRI3BPQ8WY22 251 aa26.69■■□□□ 1.86
VPS37C-202ENST00000535818 ZHX2Q9Y6X8 837 aa26.69■■□□□ 1.86
VPS37C-202ENST00000535818 ATAD5Q96QE3 1844 aa26.69■■□□□ 1.86
VPS37C-202ENST00000535818 TBC1D8O95759 1140 aa26.68■■□□□ 1.86
VPS37C-202ENST00000535818 OSBPL3Q9H4L5 887 aa26.68■■□□□ 1.86
VPS37C-202ENST00000535818 M0R2C6 588 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 GPAA1O43292 621 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 PLCD1P51178 756 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 COL13A1Q5TAT6 717 aaPredicted RBP26.67■■□□□ 1.86
VPS37C-202ENST00000535818 RILPL2Q969X0 211 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 STRBPQ96SI9 672 aaKnown RBP26.67■■□□□ 1.86
VPS37C-202ENST00000535818 PTPN18Q99952 460 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.67■■□□□ 1.86
VPS37C-202ENST00000535818 KCNH4Q9UQ05 1017 aa26.67■■□□□ 1.86
VPS37C-202ENST00000535818 GDF11O95390 407 aa26.66■■□□□ 1.86
VPS37C-202ENST00000535818 RRP1BQ14684 758 aaKnown RBP26.66■■□□□ 1.86
VPS37C-202ENST00000535818 CCDC84Q86UT8 332 aaPredicted RBP26.66■■□□□ 1.86
VPS37C-202ENST00000535818 CXCL11O14625 94 aa26.65■■□□□ 1.86
VPS37C-202ENST00000535818 GNAT2P19087 354 aa26.65■■□□□ 1.86
VPS37C-202ENST00000535818 ZMYM1Q5SVZ6 1142 aa26.65■■□□□ 1.86
VPS37C-202ENST00000535818 BAZ2AQ9UIF9 1905 aaKnown RBP26.65■■□□□ 1.86
VPS37C-202ENST00000535818 TRIM75PA6NK02 468 aa26.64■■□□□ 1.86
VPS37C-202ENST00000535818 ASNSP08243 561 aa26.64■■□□□ 1.86
VPS37C-202ENST00000535818 CYP2D6P10635 497 aa26.64■■□□□ 1.86
VPS37C-202ENST00000535818 SEC62Q99442 399 aaKnown RBP26.64■■□□□ 1.86
VPS37C-202ENST00000535818 AS3MTQ9HBK9 375 aa26.64■■□□□ 1.86
VPS37C-202ENST00000535818 AFG3L2Q9Y4W6 797 aa26.64■■□□□ 1.86
VPS37C-202ENST00000535818 USP17L5A8MUK1 530 aa26.63■■□□□ 1.85
VPS37C-202ENST00000535818 FAM43AQ8N2R8 423 aa26.63■■□□□ 1.85
VPS37C-202ENST00000535818 CFHR5Q9BXR6 569 aa26.63■■□□□ 1.85
VPS37C-202ENST00000535818 TBC1D2Q9BYX2 928 aa26.63■■□□□ 1.85
VPS37C-202ENST00000535818 GINM1Q9NU53 330 aa26.63■■□□□ 1.85
VPS37C-202ENST00000535818 PHIPQ8WWQ0 1821 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 BTBD19C9JJ37 291 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 USP17L12C9JPN9 530 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 USP17L21D6R901 530 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 APPP05067 770 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 PDE4AP27815 886 aa26.62■■□□□ 1.85
VPS37C-202ENST00000535818 TAF1CQ15572 869 aaPredicted RBP26.62■■□□□ 1.85
VPS37C-202ENST00000535818 CERKLQ49MI3 558 aaPredicted RBP26.62■■□□□ 1.85
VPS37C-202ENST00000535818 TATDN1Q6P1N9 297 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms