RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 KLHDC4Q8TBB5 520 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 KCNG4Q8TDN1 519 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 CELF1Q92879 486 aaKnown RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 MYH13Q9UKX3 1938 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 DICER1Q9UPY3 1922 aaKnown RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 H0YIN7 160 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 POLR3GO15318 223 aaPredicted RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 URI1O94763 535 aaPredicted RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 ITGA6P23229 1130 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 RFX5P48382 616 aaPredicted RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 TGFB2P61812 414 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 GUCY1B3Q02153 619 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 APOBRQ0VD83 1088 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 STK38Q15208 465 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 MUM1L1Q5H9M0 696 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 CCDC129Q6ZRS4 1044 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 IPO4Q8TEX9 1081 aaKnown RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 ZNF594Q96JF6 807 aaPredicted RBP10.25□□□□□ -0.77
SORL1-213ENST00000534754 ARAP2Q8WZ64 1704 aa10.25□□□□□ -0.77
SORL1-213ENST00000534754 CHD4Q14839 1912 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 IKBKBO14920 756 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 NPR1P16066 1061 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 CCT2P78371 535 aaKnown RBP10.24□□□□□ -0.77
SORL1-213ENST00000534754 FANCCQ00597 558 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 TRIM65Q6PJ69 517 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 STOX1Q6ZVD7 989 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 FCHSD1Q86WN1 690 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 RPGRQ92834 1020 aaKnown RBP10.24□□□□□ -0.77
SORL1-213ENST00000534754 MASTLQ96GX5 879 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 AGXT2Q9BYV1 514 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 UBXN6Q9BZV1 441 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 SNED1Q8TER0 1413 aa10.24□□□□□ -0.77
SORL1-213ENST00000534754 ZSCAN12O43309 604 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 CBFA2T2O43439 604 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 YEATS4O95619 227 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 PDE4CQ08493 712 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 NCAPHQ15003 741 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 STYK1Q6J9G0 422 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 LINC00301Q8NCQ3 95 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
SORL1-213ENST00000534754 CARD6Q9BX69 1037 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 DBNLQ9UJU6 430 aaKnown RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 BIN1O00499 593 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 LMOD1P29536 600 aaPredicted RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 NEDD4P46934 1319 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 EVCP57679 992 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 NEK11Q8NG66 645 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 ZNF274Q96GC6 653 aaPredicted RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 SEC62Q99442 399 aaKnown RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 NCOA5Q9HCD5 579 aaKnown RBP10.23□□□□□ -0.77
SORL1-213ENST00000534754 POLR3EQ9NVU0 708 aa10.23□□□□□ -0.77
SORL1-213ENST00000534754 SPTLC2O15270 562 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 SEC31AO94979 1220 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 OAS2P29728 719 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 GRAPQ13588 217 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 TNNI3KQ59H18 835 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 DDX46Q7L014 1031 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 GPR161Q8N6U8 529 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 GRAPLQ8TC17 118 aaPredicted RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 TRERF1Q96PN7 1200 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 CRAMP1Q96RY5 1269 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 HAUS7Q99871 368 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 TMX1Q9H3N1 280 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 FEZ2Q9UHY8 353 aaPredicted RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 FPGT-TNNI3KV9GXZ4 949 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 ZNF646O15015 1829 aaPredicted RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 ZNF202O95125 648 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 TBC1D8O95759 1140 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 UBASH3AP57075 661 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 PTPN12Q05209 780 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 IFIT5Q13325 482 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 SMC1AQ14683 1233 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 REXO1L1PQ8IX06 675 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 RBM17Q96I25 401 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 PUS3Q9BZE2 481 aaKnown RBP10.22□□□□□ -0.77
SORL1-213ENST00000534754 COPRSQ9NQ92 184 aa10.22□□□□□ -0.77
SORL1-213ENST00000534754 ANKRD18BA2A2Z9 1011 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 GOLGA6L9A6NEM1 432 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 SERPINC1P01008 464 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 CCDC57Q2TAC2 916 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 KRBA2Q6ZNG9 492 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 SMARCE1Q969G3 411 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 DSCC1Q9BVC3 393 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 TRIM34Q9BYJ4 488 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 CLIC4Q9Y696 253 aa10.21□□□□□ -0.77
SORL1-213ENST00000534754 PSME4Q14997 1843 aa10.21□□□□□ -0.78
SORL1-213ENST00000534754 SCN9AQ15858 1988 aa10.21□□□□□ -0.78
SORL1-213ENST00000534754 FANCGO15287 622 aa10.21□□□□□ -0.78
SORL1-213ENST00000534754 ARHGAP6O43182 974 aa10.21□□□□□ -0.78
SORL1-213ENST00000534754 MYO1BO43795 1136 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms