RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 METTL16Q86W50 562 aaKnown RBP23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 RPAP2Q8IXW5 612 aaPredicted RBP23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 DDX19BQ9UMR2 479 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 EXOC6BQ9Y2D4 811 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 DOCK1Q14185 1865 aa23.02■■□□□ 1.28
NDUFS3-213ENST00000534716 MKI67P46013 3256 aaKnown RBP23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 CAP2P40123 477 aa23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 PRPF38BQ5VTL8 546 aaKnown RBP23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 CERS3Q8IU89 383 aa23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 TRIM47Q96LD4 638 aa23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 ZBTB40Q9NUA8 1239 aa23.01■■□□□ 1.27
NDUFS3-213ENST00000534716 RBBP6Q7Z6E9 1792 aaKnown RBP23■■□□□ 1.27
NDUFS3-213ENST00000534716 FAM196BA6NMK8 535 aa23■■□□□ 1.27
NDUFS3-213ENST00000534716 CYP2C8P10632 490 aa23■■□□□ 1.27
NDUFS3-213ENST00000534716 PSMC4P43686 418 aa23■■□□□ 1.27
NDUFS3-213ENST00000534716 SRRDQ9UH36 339 aa23■■□□□ 1.27
NDUFS3-213ENST00000534716 FLT1P17948 1338 aa23■■□□□ 1.27
NDUFS3-213ENST00000534716 PHIPQ8WWQ0 1821 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 TRIM75PA6NK02 468 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 HOXD10P28358 340 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 RRP1BQ14684 758 aaKnown RBP22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 GADL1Q6ZQY3 521 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 AACSQ86V21 672 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 PROCA1Q8NCQ7 364 aaPredicted RBP22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 RHPN1Q8TCX5 695 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 TGFBRAP1Q8WUH2 860 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 CHMP4BQ9H444 224 aaKnown RBP22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 AGTPBP1Q9UPW5 1226 aa22.99■■□□□ 1.27
NDUFS3-213ENST00000534716 FOXP4Q8IVH2 680 aaPredicted RBP22.98■■□□□ 1.27
NDUFS3-213ENST00000534716 ZNF280CQ8ND82 737 aa22.98■■□□□ 1.27
NDUFS3-213ENST00000534716 RCAN3Q9UKA8 241 aa22.98■■□□□ 1.27
NDUFS3-213ENST00000534716 USP17L5A8MUK1 530 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 FMNL1O95466 1100 aaPredicted RBP22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 OSBPP22059 807 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 CYP7A1P22680 504 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 MAPKAPK5Q8IW41 473 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 SIRT2Q8IXJ6 389 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 TMEM106CQ9BVX2 250 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
NDUFS3-213ENST00000534716 HMMRO75330 724 aa22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 IDH1O75874 414 aaKnown RBP22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 SH3D19Q5HYK7 790 aa22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 KIF1BPQ96EK5 621 aa22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 GINM1Q9NU53 330 aa22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 ZSWIM8A7E2V4 1837 aa22.96■■□□□ 1.27
NDUFS3-213ENST00000534716 EN2P19622 333 aaPredicted RBP22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 FCGRTP55899 365 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 MAP3K12Q12852 859 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 SPP2Q13103 211 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 WDR18Q9BV38 432 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 ANTXR1Q9H6X2 564 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 DNAJC18Q9H819 358 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 PALD1Q9ULE6 856 aa22.95■■□□□ 1.26
NDUFS3-213ENST00000534716 PTPRFP10586 1907 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 RAB11FIP3O75154 756 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 DYNLL1P63167 89 aaKnown RBP22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 TREML2Q5T2D2 321 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 CLASRPQ8N2M8 674 aaKnown RBP22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 MAGEB6Q8N7X4 407 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 SH3TC2Q8TF17 1288 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 AS3MTQ9HBK9 375 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 IL1RAPL2Q9NP60 686 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 PNMA3Q9UL41 463 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 SIPA1L1O43166 1804 aa22.94■■□□□ 1.26
NDUFS3-213ENST00000534716 MYPNQ86TC9 1320 aa22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 ASNSP08243 561 aa22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 TTF1Q15361 905 aaPredicted RBP22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 SMCR8Q8TEV9 937 aaPredicted RBP22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 NDUFB9Q9Y6M9 179 aa22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 FOCADQ5VW36 1801 aa22.93■■□□□ 1.26
NDUFS3-213ENST00000534716 HLA-DOAP06340 250 aa22.92■■□□□ 1.26
NDUFS3-213ENST00000534716 PABPC4Q13310 644 aaKnown RBP eCLIP22.92■■□□□ 1.265e-6■□□□□ 10.8
NDUFS3-213ENST00000534716 PDE3AQ14432 1141 aa22.92■■□□□ 1.26
NDUFS3-213ENST00000534716 RAET1EQ8TD07 263 aa22.92■■□□□ 1.26
NDUFS3-213ENST00000534716 GRK4P32298 578 aa22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 HMGCS2P54868 508 aa22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 SLC4A8Q2Y0W8 1093 aa22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 CRACR2BQ8N4Y2 399 aaPredicted RBP22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 MIGA1Q8NAN2 632 aa22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 LOC285556D6RIA3 1793 aa22.91■■□□□ 1.26
NDUFS3-213ENST00000534716 MYO5AQ9Y4I1 1855 aaKnown RBP22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 BACE1P56817 501 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 JAG1P78504 1218 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 PRKCZQ05513 592 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 FAM110CQ1W6H9 321 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 RIOK1Q9BRS2 568 aaKnown RBP22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 TRIM34Q9BYJ4 488 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 EHD4Q9H223 541 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 SAP30BPQ9UHR5 308 aaKnown RBP22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 CDK5RAP2Q96SN8 1893 aa22.9■■□□□ 1.26
NDUFS3-213ENST00000534716 ECM2O94769 699 aaPredicted RBP22.89■■□□□ 1.25
NDUFS3-213ENST00000534716 IFIT2P09913 472 aaKnown RBP22.89■■□□□ 1.25
NDUFS3-213ENST00000534716 GCLCP48506 637 aaPredicted RBP22.89■■□□□ 1.25
NDUFS3-213ENST00000534716 TATDN1Q6P1N9 297 aa22.89■■□□□ 1.25
NDUFS3-213ENST00000534716 ATAD5Q96QE3 1844 aa22.88■■□□□ 1.25
NDUFS3-213ENST00000534716 C19orf81C9J6K1 198 aa22.88■■□□□ 1.25
NDUFS3-213ENST00000534716 HOXA7P31268 230 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms