RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 DDX4Q9NQI0 724 aaKnown RBP14.28□□□□□ -0.12
CTNND1-238ENST00000534647 MYH13Q9UKX3 1938 aa14.28□□□□□ -0.12
CTNND1-238ENST00000534647 BRCA2P51587 3418 aa14.27□□□□□ -0.12
CTNND1-238ENST00000534647 MROH7-TTC4A0A0A0MT08 1334 aa14.27□□□□□ -0.12
CTNND1-238ENST00000534647 A0A1B0GUL7 405 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 BTDP43251 543 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 RARSP54136 660 aaKnown RBP14.27□□□□□ -0.13
CTNND1-238ENST00000534647 IRF5Q13568 498 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 ZSCAN29Q8IWY8 852 aaPredicted RBP14.27□□□□□ -0.13
CTNND1-238ENST00000534647 RNF208Q9H0X6 261 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 C1orf115Q9H7X2 142 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 ABCF2Q9UG63 623 aa14.27□□□□□ -0.13
CTNND1-238ENST00000534647 SRGAP3O43295 1099 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 LDHCP07864 332 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 MECOMQ03112 1051 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 TFCP2Q12800 502 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 HTATIP2Q9BUP3 242 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 TBC1D2Q9BYX2 928 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 OSBPL5Q9H0X9 879 aaPredicted RBP14.26□□□□□ -0.13
CTNND1-238ENST00000534647 GABRQQ9UN88 632 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 CEP290O15078 2479 aa14.26□□□□□ -0.13
CTNND1-238ENST00000534647 COL2A1P02458 1487 aaPredicted RBP14.25□□□□□ -0.13
CTNND1-238ENST00000534647 ADCY3O60266 1144 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 SGPL1O95470 568 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 GSTO1P78417 241 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 GADL1Q6ZQY3 521 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
CTNND1-238ENST00000534647 U2AF1L4Q8WU68 220 aaKnown RBP14.25□□□□□ -0.13
CTNND1-238ENST00000534647 DPF3Q92784 378 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 HMG20BQ9P0W2 317 aa14.25□□□□□ -0.13
CTNND1-238ENST00000534647 BIN2Q9UBW5 565 aaPredicted RBP14.25□□□□□ -0.13
CTNND1-238ENST00000534647 AK9Q5TCS8 1911 aa14.24□□□□□ -0.13
CTNND1-238ENST00000534647 ARID4AP29374 1257 aaPredicted RBP14.24□□□□□ -0.13
CTNND1-238ENST00000534647 FLT3LGP49771 235 aa14.24□□□□□ -0.13
CTNND1-238ENST00000534647 SPATA5Q8NB90 893 aa14.24□□□□□ -0.13
CTNND1-238ENST00000534647 NSUN4Q96CB9 384 aaKnown RBP14.24□□□□□ -0.13
CTNND1-238ENST00000534647 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
CTNND1-238ENST00000534647 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 IGSF3O75054 1194 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 PICALMQ13492 652 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 FAM110CQ1W6H9 321 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 SMCR8Q8TEV9 937 aaPredicted RBP14.23□□□□□ -0.13
CTNND1-238ENST00000534647 UNC93B1Q9H1C4 597 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.23□□□□□ -0.13
CTNND1-238ENST00000534647 PNMA3Q9UL41 463 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 NR2E3Q9Y5X4 410 aa14.23□□□□□ -0.13
CTNND1-238ENST00000534647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.23□□□□□ -0.13
CTNND1-238ENST00000534647 DOCK2Q92608 1830 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 TNPO2O14787 897 aaKnown RBP14.22□□□□□ -0.13
CTNND1-238ENST00000534647 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
CTNND1-238ENST00000534647 SLURP2P0DP57 97 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 CAP2P40123 477 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 GCLCP48506 637 aaPredicted RBP14.22□□□□□ -0.13
CTNND1-238ENST00000534647 SH3D19Q5HYK7 790 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 COA7Q96BR5 231 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 CRISPLD2Q9H0B8 497 aa14.22□□□□□ -0.13
CTNND1-238ENST00000534647 PAK6Q9NQU5 681 aaPredicted RBP14.22□□□□□ -0.13
CTNND1-238ENST00000534647 HERC5Q9UII4 1024 aaKnown RBP14.22□□□□□ -0.13
CTNND1-238ENST00000534647 FARP2O94887 1054 aaPredicted RBP14.21□□□□□ -0.13
CTNND1-238ENST00000534647 INHAP05111 366 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 UQCRFS1P1P0C7P4 283 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 SPP2Q13103 211 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.13
CTNND1-238ENST00000534647 E2F4Q16254 413 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 TREML2Q5T2D2 321 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 GORABQ5T7V8 394 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 CHRDL2Q6WN34 429 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 ZNF280CQ8ND82 737 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 DHX36Q9H2U1 1008 aaKnown RBP14.21□□□□□ -0.13
CTNND1-238ENST00000534647 GPR108Q9NPR9 543 aa14.21□□□□□ -0.13
CTNND1-238ENST00000534647 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
CTNND1-238ENST00000534647 TRIOBPQ9H2D6 2365 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 USP17L5A8MUK1 530 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 ZBTB7BO15156 539 aaPredicted RBP14.2□□□□□ -0.14
CTNND1-238ENST00000534647 GNAI2P04899 355 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 ELNP15502 786 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 G3BP1Q13283 466 aaKnown RBP eCLIP14.2□□□□□ -0.141e-9■□□□□ 10.5
CTNND1-238ENST00000534647 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
CTNND1-238ENST00000534647 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 WDR18Q9BV38 432 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 PI4KBQ9UBF8 816 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
CTNND1-238ENST00000534647 MGAMO43451 1857 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 A0A1W2PPC1 479 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 TRIM27P14373 513 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 MCAMP43121 646 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 PPP4CP60510 307 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 PI16Q6UXB8 463 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 ATF7IPQ6VMQ6 1270 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
CTNND1-238ENST00000534647 IL27Q8NEV9 243 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 GINM1Q9NU53 330 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 RAI14Q9P0K7 980 aa14.19□□□□□ -0.14
CTNND1-238ENST00000534647 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms