RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 KIF1BPQ96EK5 621 aa26.21■■□□□ 1.79
GSDMD-216ENST00000534602 ARHGAP39Q9C0H5 1083 aa26.21■■□□□ 1.79
GSDMD-216ENST00000534602 PTCH2Q9Y6C5 1203 aa26.21■■□□□ 1.79
GSDMD-216ENST00000534602 PHIPQ8WWQ0 1821 aa26.21■■□□□ 1.79
GSDMD-216ENST00000534602 MYO5AQ9Y4I1 1855 aaKnown RBP26.2■■□□□ 1.78
GSDMD-216ENST00000534602 FAM196BA6NMK8 535 aa26.2■■□□□ 1.78
GSDMD-216ENST00000534602 CAP2P40123 477 aa26.2■■□□□ 1.78
GSDMD-216ENST00000534602 NBPF11Q86T75 865 aa26.2■■□□□ 1.78
GSDMD-216ENST00000534602 METTL16Q86W50 562 aaKnown RBP26.2■■□□□ 1.78
GSDMD-216ENST00000534602 SIRT2Q8IXJ6 389 aa26.2■■□□□ 1.78
GSDMD-216ENST00000534602 CLASRPQ8N2M8 674 aaKnown RBP26.2■■□□□ 1.78
GSDMD-216ENST00000534602 TGFBRAP1Q8WUH2 860 aa26.2■■□□□ 1.78
GSDMD-216ENST00000534602 FLT1P17948 1338 aa26.19■■□□□ 1.78
GSDMD-216ENST00000534602 IDH1O75874 414 aaKnown RBP26.19■■□□□ 1.78
GSDMD-216ENST00000534602 CYP7A1P22680 504 aa26.19■■□□□ 1.78
GSDMD-216ENST00000534602 PDE3AQ14432 1141 aa26.19■■□□□ 1.78
GSDMD-216ENST00000534602 FOXP4Q8IVH2 680 aaPredicted RBP26.19■■□□□ 1.78
GSDMD-216ENST00000534602 PTPRFP10586 1907 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 TRIM75PA6NK02 468 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 RAB11FIP3O75154 756 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 BCRP11274 1271 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 MAP3K12Q12852 859 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 SLC9C1Q4G0N8 1177 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 GADL1Q6ZQY3 521 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 MAPKAPK5Q8IW41 473 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 ZNF333Q96JL9 665 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 IL1RAPL2Q9NP60 686 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 FOCADQ5VW36 1801 aa26.18■■□□□ 1.78
GSDMD-216ENST00000534602 CYP2C8P10632 490 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 HOXD10P28358 340 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 PSMC4P43686 418 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 ZNF280CQ8ND82 737 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 AGTPBP1Q9UPW5 1226 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 CENPFP49454 3210 aa26.17■■□□□ 1.78
GSDMD-216ENST00000534602 RBBP6Q7Z6E9 1792 aaKnown RBP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 TTF1Q15361 905 aaPredicted RBP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 PROCA1Q8NCQ7 364 aaPredicted RBP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 TRIM47Q96LD4 638 aa26.16■■□□□ 1.78
GSDMD-216ENST00000534602 ANTXR1Q9H6X2 564 aa26.16■■□□□ 1.78
GSDMD-216ENST00000534602 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 CDK5RAP2Q96SN8 1893 aa26.16■■□□□ 1.78
GSDMD-216ENST00000534602 KIAA0100Q14667 2235 aaKnown RBP26.16■■□□□ 1.78
GSDMD-216ENST00000534602 USP17L5A8MUK1 530 aa26.15■■□□□ 1.78
GSDMD-216ENST00000534602 RRP1BQ14684 758 aaKnown RBP26.15■■□□□ 1.78
GSDMD-216ENST00000534602 MAGEB6Q8N7X4 407 aa26.15■■□□□ 1.78
GSDMD-216ENST00000534602 GINM1Q9NU53 330 aa26.15■■□□□ 1.78
GSDMD-216ENST00000534602 SRRDQ9UH36 339 aa26.15■■□□□ 1.78
GSDMD-216ENST00000534602 POTEFA5A3E0 1075 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 CTGFP29279 349 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 DYNLL1P63167 89 aaKnown RBP26.14■■□□□ 1.78
GSDMD-216ENST00000534602 SPP2Q13103 211 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 CCDC84Q86UT8 332 aaPredicted RBP26.14■■□□□ 1.78
GSDMD-216ENST00000534602 AS3MTQ9HBK9 375 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 PALD1Q9ULE6 856 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 NDUFB9Q9Y6M9 179 aa26.14■■□□□ 1.78
GSDMD-216ENST00000534602 ZSWIM8A7E2V4 1837 aa26.14■■□□□ 1.77
GSDMD-216ENST00000534602 SIPA1L1O43166 1804 aa26.14■■□□□ 1.77
GSDMD-216ENST00000534602 FMNL1O95466 1100 aaPredicted RBP26.13■■□□□ 1.77
GSDMD-216ENST00000534602 HLA-DOAP06340 250 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 ASNSP08243 561 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 IFIT2P09913 472 aaKnown RBP26.13■■□□□ 1.77
GSDMD-216ENST00000534602 CRACR2BQ8N4Y2 399 aaPredicted RBP26.13■■□□□ 1.77
GSDMD-216ENST00000534602 WDR18Q9BV38 432 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 TMEM106CQ9BVX2 250 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 TRIM34Q9BYJ4 488 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 PNMA3Q9UL41 463 aa26.13■■□□□ 1.77
GSDMD-216ENST00000534602 ATAD5Q96QE3 1844 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 OSBPP22059 807 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 FCGRTP55899 365 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 SH3D19Q5HYK7 790 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 MIGA1Q8NAN2 632 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 DNAJC18Q9H819 358 aa26.12■■□□□ 1.77
GSDMD-216ENST00000534602 APBB1O00213 710 aa26.11■■□□□ 1.77
GSDMD-216ENST00000534602 PABPC4Q13310 644 aaKnown RBP eCLIP26.11■■□□□ 1.77
GSDMD-216ENST00000534602 SMCR8Q8TEV9 937 aaPredicted RBP26.11■■□□□ 1.77
GSDMD-216ENST00000534602 USP5P45974 858 aa26.1■■□□□ 1.77
GSDMD-216ENST00000534602 TREML2Q5T2D2 321 aa26.1■■□□□ 1.77
GSDMD-216ENST00000534602 SAP30BPQ9UHR5 308 aaKnown RBP26.1■■□□□ 1.77
GSDMD-216ENST00000534602 HMGCS2P54868 508 aa26.09■■□□□ 1.77
GSDMD-216ENST00000534602 C20orf194Q5TEA3 1177 aa26.09■■□□□ 1.77
GSDMD-216ENST00000534602 LOC285556D6RIA3 1793 aa26.09■■□□□ 1.77
GSDMD-216ENST00000534602 MYPNQ86TC9 1320 aa26.09■■□□□ 1.77
GSDMD-216ENST00000534602 SLC9C2Q5TAH2 1124 aa26.08■■□□□ 1.77
GSDMD-216ENST00000534602 PRPF38BQ5VTL8 546 aaKnown RBP26.08■■□□□ 1.77
GSDMD-216ENST00000534602 RAET1EQ8TD07 263 aa26.08■■□□□ 1.77
GSDMD-216ENST00000534602 SH3TC2Q8TF17 1288 aa26.08■■□□□ 1.77
GSDMD-216ENST00000534602 RIOK1Q9BRS2 568 aaKnown RBP26.08■■□□□ 1.77
GSDMD-216ENST00000534602 EHD4Q9H223 541 aa26.08■■□□□ 1.77
GSDMD-216ENST00000534602 BACE1P56817 501 aa26.07■■□□□ 1.76
GSDMD-216ENST00000534602 TTC6Q86TZ1 520 aa26.07■■□□□ 1.76
GSDMD-216ENST00000534602 MAGEB6P1A0A0J9YX57 407 aa26.06■■□□□ 1.76
GSDMD-216ENST00000534602 C19orf81C9J6K1 198 aa26.06■■□□□ 1.76
GSDMD-216ENST00000534602 ECM2O94769 699 aaPredicted RBP26.06■■□□□ 1.76
GSDMD-216ENST00000534602 PDE6AP16499 860 aa26.06■■□□□ 1.76
GSDMD-216ENST00000534602 EN2P19622 333 aaPredicted RBP26.06■■□□□ 1.76
GSDMD-216ENST00000534602 GCLCP48506 637 aaPredicted RBP26.06■■□□□ 1.76
GSDMD-216ENST00000534602 JAG1P78504 1218 aa26.06■■□□□ 1.76
GSDMD-216ENST00000534602 FAM110CQ1W6H9 321 aa26.06■■□□□ 1.76
GSDMD-216ENST00000534602 SLC4A8Q2Y0W8 1093 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms