RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 RPS6KB1P23443 525 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 CRHR2Q13324 411 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 LDHAL6AQ6ZMR3 332 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 ANKRD13AQ8IZ07 590 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 RASEFQ8IZ41 740 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 NEK1Q96PY6 1258 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 PTPN18Q99952 460 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 LMBRD1Q9NUN5 540 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 PTPN22Q9Y2R2 807 aa12.65□□□□□ -0.38
NCAPD3-212ENST00000534290 SSC5DA1L4H1 1573 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 A0A1B0GUL7 405 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 STX6O43752 255 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 UQCRFS1P1P0C7P4 283 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 ZSCAN22P10073 491 aaPredicted RBP12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 GJA5P36382 358 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 ZNF445P59923 1031 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 FGD1P98174 961 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 NOL8Q76FK4 1167 aaKnown RBP12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 ZNF512BQ96KM6 892 aaPredicted RBP12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 CNNM1Q9NRU3 951 aa12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 TLR7Q9NYK1 1049 aaKnown RBP12.64□□□□□ -0.39
NCAPD3-212ENST00000534290 A0A0D9SFI3 127 aa12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 SP3Q02447 781 aa12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 ELP3Q9H9T3 547 aa12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 ZNF70Q9UC06 446 aaPredicted RBP12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 SERPINA10Q9UK55 444 aa12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 TTF2Q9UNY4 1162 aaKnown RBP12.63□□□□□ -0.39
NCAPD3-212ENST00000534290 FAM205AQ6ZU69 1335 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 MROH5Q6ZUA9 1318 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 GOLIM4O00461 696 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 HIBADHP31937 336 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 TIMM10P62072 90 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 METTL24Q5JXM2 366 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 ZMYM1Q5SVZ6 1142 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 TDRD7Q8NHU6 1098 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 OPTNQ96CV9 577 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 TRIM44Q96DX7 344 aaPredicted RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 LLPHQ9BRT6 129 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 TDRD3Q9H7E2 651 aaKnown RBP12.62□□□□□ -0.39
NCAPD3-212ENST00000534290 XRCC6P12956 609 aaKnown RBP eCLIP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 EN2P19622 333 aaPredicted RBP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 GYG1P46976 350 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 UBE4AQ14139 1066 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 ATP2B3Q16720 1220 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 LARP1BQ659C4 914 aaKnown RBP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 FAM84BQ96KN1 310 aaPredicted RBP12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 TEPSINQ96N21 525 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 IL25Q9H293 177 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 ZDHHC9Q9Y397 364 aa12.61□□□□□ -0.39
NCAPD3-212ENST00000534290 TCP10L2B9ZVM9 353 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 DHX16O60231 1041 aaKnown RBP12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 SYT1P21579 422 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 GJB2P29033 226 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 MAP3K9P80192 1104 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 CAP1Q01518 475 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 LRRC24Q50LG9 513 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 DHX32Q7L7V1 743 aaKnown RBP12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 CDAN1Q8IWY9 1227 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 TMEM87AQ8NBN3 555 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 CNKSR2Q8WXI2 1034 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 XAGE2Q96GT9 111 aa12.6□□□□□ -0.39
NCAPD3-212ENST00000534290 F13A1P00488 732 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 CRKP46108 304 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 TNNI2P48788 182 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 GTF2A2P52657 109 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 IMMTQ16891 758 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 CAVIN1Q6NZI2 390 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 NBPF11Q86T75 865 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 CCDC83Q8IWF9 413 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 BRI3BPQ8WY22 251 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 PUS3Q9BZE2 481 aaKnown RBP12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 TMEM39BQ9GZU3 492 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 ZFYVE28Q9HCC9 887 aa12.59□□□□□ -0.39
NCAPD3-212ENST00000534290 CCL15-CCL14A0A0B4J2E2 113 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 SLC5A1P13866 664 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 UBE2HP62256 183 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 VGLL4Q14135 290 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 CCL15Q16663 113 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 ADCK5Q3MIX3 580 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 ZSCAN23Q3MJ62 389 aa12.58□□□□□ -0.4
NCAPD3-212ENST00000534290 VPS37DQ86XT2 251 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms