RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 HSP90AB4PQ58FF6 505 aa10.89□□□□□ -0.67
COPB1-211ENST00000534234 TRIM47Q96LD4 638 aa10.89□□□□□ -0.67
COPB1-211ENST00000534234 HERC5Q9UII4 1024 aaKnown RBP10.89□□□□□ -0.67
COPB1-211ENST00000534234 ADGRA2Q96PE1 1338 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 MYCP01106 439 aaPredicted RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 BCRP11274 1271 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 EN2P19622 333 aaPredicted RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 CYP7A1P22680 504 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 SPP2Q13103 211 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 RRP1BQ14684 758 aaKnown RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 AACSQ86V21 672 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 FOXP4Q8IVH2 680 aaPredicted RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 RPAP2Q8IXW5 612 aaPredicted RBP10.88□□□□□ -0.67
COPB1-211ENST00000534234 SH3TC2Q8TF17 1288 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 RNF39Q9H2S5 420 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 IL1RAPL2Q9NP60 686 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 SRRDQ9UH36 339 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 DDX19BQ9UMR2 479 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 COG6Q9Y2V7 657 aa10.88□□□□□ -0.67
COPB1-211ENST00000534234 LAMB1P07942 1786 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 OSBPP22059 807 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 DYNLL1P63167 89 aaKnown RBP10.87□□□□□ -0.67
COPB1-211ENST00000534234 SLC4A8Q2Y0W8 1093 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 ZNF280CQ8ND82 737 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 RHPN1Q8TCX5 695 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 ANTXR1Q9H6X2 564 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 ZBTB40Q9NUA8 1239 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 SLC45A1Q9Y2W3 748 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 MYH13Q9UKX3 1938 aa10.87□□□□□ -0.67
COPB1-211ENST00000534234 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 APBB1O00213 710 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 HMMRO75330 724 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 MAP3K12Q12852 859 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 PRPF38BQ5VTL8 546 aaKnown RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 CRACR2BQ8N4Y2 399 aaPredicted RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 MIGA1Q8NAN2 632 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 RAET1EQ8TD07 263 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 SMCR8Q8TEV9 937 aaPredicted RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 TBC1D2Q9BYX2 928 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 RCAN3Q9UKA8 241 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 AGTPBP1Q9UPW5 1226 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 COL2A1P02458 1487 aaPredicted RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 FLT1P17948 1338 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 HMGCS2P54868 508 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 FCGRTP55899 365 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 TREML2Q5T2D2 321 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 METTL16Q86W50 562 aaKnown RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 CERS3Q8IU89 383 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 SIRT2Q8IXJ6 389 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 CLASRPQ8N2M8 674 aaKnown RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 MAGEB6Q8N7X4 407 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 PROCA1Q8NCQ7 364 aaPredicted RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 KIF1BPQ96EK5 621 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 TRIM34Q9BYJ4 488 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 CHMP4BQ9H444 224 aaKnown RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 AS3MTQ9HBK9 375 aa10.86□□□□□ -0.67
COPB1-211ENST00000534234 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
COPB1-211ENST00000534234 MYH2Q9UKX2 1941 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 MYPNQ86TC9 1320 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 ASNSP08243 561 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 GRK4P32298 578 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 USP5P45974 858 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 JAG1P78504 1218 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
COPB1-211ENST00000534234 HLA-DOAP06340 250 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 IFIT2P09913 472 aaKnown RBP10.84□□□□□ -0.67
COPB1-211ENST00000534234 PRKCZQ05513 592 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 PABPC4Q13310 644 aaKnown RBP eCLIP10.84□□□□□ -0.67
COPB1-211ENST00000534234 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
COPB1-211ENST00000534234 MTFR1Q15390 333 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 TMED8Q6PL24 325 aaPredicted RBP10.84□□□□□ -0.67
COPB1-211ENST00000534234 ANKRD13CQ8N6S4 541 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 WDR18Q9BV38 432 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 BIN2Q9UBW5 565 aaPredicted RBP10.84□□□□□ -0.67
COPB1-211ENST00000534234 GABRQQ9UN88 632 aa10.84□□□□□ -0.67
COPB1-211ENST00000534234 TNPO2O14787 897 aaKnown RBP10.83□□□□□ -0.68
COPB1-211ENST00000534234 RAB11FIP3O75154 756 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 GDF11O95390 407 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 BACE1P56817 501 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 SLC9C2Q5TAH2 1124 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 GINM1Q9NU53 330 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 AK9Q5TCS8 1911 aa10.83□□□□□ -0.68
COPB1-211ENST00000534234 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
COPB1-211ENST00000534234 GCLCP48506 637 aaPredicted RBP10.82□□□□□ -0.68
COPB1-211ENST00000534234 FLT3LGP49771 235 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 MTMR2Q13614 643 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 PDE3AQ14432 1141 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 TTC6Q86TZ1 520 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 DNAJC2Q99543 621 aaKnown RBP10.82□□□□□ -0.68
COPB1-211ENST00000534234 ASCC2Q9H1I8 757 aaPredicted RBP10.82□□□□□ -0.68
COPB1-211ENST00000534234 TMOD4Q9NZQ9 345 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 HTTP42858 3142 aa10.82□□□□□ -0.68
COPB1-211ENST00000534234 MAGEB6P1A0A0J9YX57 407 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms