RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 GJA5P36382 358 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 COL13A1Q5TAT6 717 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-227ENST00000533909 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
CAPN1-227ENST00000533909 FSD1Q9BTV5 496 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
CAPN1-227ENST00000533909 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 IGHDP01880 384 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-227ENST00000533909 MAP3K10Q02779 954 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-227ENST00000533909 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CAPN1-227ENST00000533909 IRF6O14896 467 aa16.11■□□□□ 0.17
CAPN1-227ENST00000533909 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
CAPN1-227ENST00000533909 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
CAPN1-227ENST00000533909 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
CAPN1-227ENST00000533909 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
CAPN1-227ENST00000533909 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
CAPN1-227ENST00000533909 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 PDE1AP54750 535 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 NUCB1Q02818 461 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CAPN1-227ENST00000533909 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-227ENST00000533909 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
CAPN1-227ENST00000533909 PTPRAP18433 802 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 MYH7P12883 1935 aa16.09■□□□□ 0.17
CAPN1-227ENST00000533909 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
CAPN1-227ENST00000533909 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
CAPN1-227ENST00000533909 CXCL11O14625 94 aa16.08■□□□□ 0.16
CAPN1-227ENST00000533909 CAP2P40123 477 aa16.08■□□□□ 0.16
CAPN1-227ENST00000533909 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
CAPN1-227ENST00000533909 EHD4Q9H223 541 aa16.08■□□□□ 0.16
CAPN1-227ENST00000533909 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-227ENST00000533909 MYH1P12882 1939 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 PRKAB2O43741 272 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 CHGBP05060 677 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-227ENST00000533909 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
CAPN1-227ENST00000533909 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 PTPN18Q99952 460 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 ZFYVE28Q9HCC9 887 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
CAPN1-227ENST00000533909 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GPR25O00155 361 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GDF11O95390 407 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 APPP05067 770 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 ASNSP08243 561 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GNAT2P19087 354 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 CRHR2Q13324 411 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
CAPN1-227ENST00000533909 GPAA1O43292 621 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 PLCD1P51178 756 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 ZCCHC17Q9NP64 241 aaKnown RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-227ENST00000533909 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
CAPN1-227ENST00000533909 CASP8AP2Q9UKL3 1982 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 BTBD19C9JJ37 291 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
CAPN1-227ENST00000533909 FKTNO75072 461 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 NEFLP07196 543 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 TDO2P48775 406 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 SPP2Q13103 211 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 ANKRD23Q86SG2 305 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CAPN1-227ENST00000533909 NACAP1Q9BZK3 213 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 DNAJC18Q9H819 358 aa16.04■□□□□ 0.16
CAPN1-227ENST00000533909 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms