RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 Q7L0L9 218 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 RALYLQ86SE5 291 aaKnown RBP11.31□□□□□ -0.6
CHKA-207ENST00000533728 TTC6Q86TZ1 520 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
CHKA-207ENST00000533728 GDPD2Q9HCC8 539 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 PIH1D3Q9NQM4 214 aaKnown RBP11.31□□□□□ -0.6
CHKA-207ENST00000533728 DDX19AQ9NUU7 478 aaKnown RBP11.31□□□□□ -0.6
CHKA-207ENST00000533728 DUOX1Q9NRD9 1551 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
CHKA-207ENST00000533728 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 SEMA3EO15041 775 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 HCLS1P14317 486 aaPredicted RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 EPS15P42566 896 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 APOBRQ0VD83 1088 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 STK3Q13188 491 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 SOGA3Q5TF21 947 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 GPR153Q6NV75 609 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 LEO1Q8WVC0 666 aaPredicted RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 SPATA32Q96LK8 384 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 ZNF396Q96N95 335 aaPredicted RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 STRBPQ96SI9 672 aaKnown RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 FUCA2Q9BTY2 467 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 CNNM2Q9H8M5 875 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 GNL3LQ9NVN8 582 aaKnown RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 BSDC1Q9NW68 430 aaPredicted RBP11.3□□□□□ -0.6
CHKA-207ENST00000533728 MYH2Q9UKX2 1941 aa11.3□□□□□ -0.6
CHKA-207ENST00000533728 PTPDC1A2A3K4 754 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 KLRG2A4D1S0 409 aaPredicted RBP11.29□□□□□ -0.6
CHKA-207ENST00000533728 ESPNB1AK53 854 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 PRC1O43663 620 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 JAK2O60674 1132 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 SERPINB2P05120 415 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 RCAN1P53805 252 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 SLFNL1Q499Z3 407 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 TTLL5Q6EMB2 1281 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 SETDB2Q96T68 719 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 MTMR10Q9NXD2 777 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 RCOR1Q9UKL0 485 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 ANGEL1Q9UNK9 670 aaKnown RBP11.29□□□□□ -0.6
CHKA-207ENST00000533728 GJA3Q9Y6H8 435 aa11.29□□□□□ -0.6
CHKA-207ENST00000533728 BAZ2AQ9UIF9 1905 aaKnown RBP11.29□□□□□ -0.6
CHKA-207ENST00000533728 FZD9O00144 591 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 PPEF1O14829 653 aaPredicted RBP11.28□□□□□ -0.6
CHKA-207ENST00000533728 IDH1O75874 414 aaKnown RBP11.28□□□□□ -0.6
CHKA-207ENST00000533728 CDKL5O76039 1030 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 CAVIN2O95810 425 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 LIFRP42702 1097 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 NT5C2P49902 561 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 ANTXR2P58335 489 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 CHRNDQ07001 517 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 PRR5LQ6MZQ0 368 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 PI16Q6UXB8 463 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 ANKRD18AQ8IVF6 992 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 NACAP1Q9BZK3 213 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 SEC31BQ9NQW1 1179 aa11.28□□□□□ -0.6
CHKA-207ENST00000533728 GOLGA6L4A6NEF3 574 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 CTAGE5O15320 804 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 TBC1D8O95759 1140 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 CCDC192P0DO97 292 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 BRAPQ7Z569 592 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 ZSCAN30Q86W11 494 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 LRRC2Q9BYS8 371 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 KRT23Q9C075 422 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 ANKRD2Q9GZV1 360 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 NUP62CLQ9H1M0 184 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 ZNF277Q9NRM2 450 aaPredicted RBP11.27□□□□□ -0.61
CHKA-207ENST00000533728 COL4A1P02462 1669 aa11.27□□□□□ -0.61
CHKA-207ENST00000533728 KLF18A0A0U1RQI7 1052 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 GPR25O00155 361 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
CHKA-207ENST00000533728 ADD1P35611 737 aaKnown RBP11.26□□□□□ -0.61
CHKA-207ENST00000533728 SCNN1DP51172 638 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 TPTE2Q6XPS3 522 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 FERMT3Q86UX7 667 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 IFNL3Q8IZI9 196 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 TMTC2Q8N394 836 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 MAGEB6Q8N7X4 407 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 DPF3Q92784 378 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 SYMPKQ92797 1274 aaKnown RBP11.26□□□□□ -0.61
CHKA-207ENST00000533728 TMEM106CQ9BVX2 250 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 NBPF3Q9H094 633 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 RNF41Q9H4P4 317 aaPredicted RBP11.26□□□□□ -0.61
CHKA-207ENST00000533728 RRAGDQ9NQL2 400 aaPredicted RBP11.26□□□□□ -0.61
CHKA-207ENST00000533728 CCDC39Q9UFE4 941 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 DENND2AQ9ULE3 1009 aa11.26□□□□□ -0.61
CHKA-207ENST00000533728 STK36Q9NRP7 1315 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms