RNA–Protein interactions for RNA: ENST00000533658.5

SOX6-216, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,202 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-216ENST00000533658 SULT6B1Q6IMI4 303 aa8.1□□□□□ -1.11
SOX6-216ENST00000533658 KIAA1324LA8MWY0 1029 aaPredicted RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 TMEM229AB2RXF0 380 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 ATP1A2P50993 1020 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 CABP4P57796 275 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 HTRA3P83110 453 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 COL13A1Q5TAT6 717 aaPredicted RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 DMRTC2Q8IXT2 367 aaPredicted RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 DEPDC4Q8N2C3 294 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 NUDT8Q8WV74 236 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 CLUAP1Q96AJ1 413 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 SRP68Q9UHB9 627 aaKnown RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 SLC6A14Q9UN76 642 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 BCS1LQ9Y276 419 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 RBM19Q9Y4C8 960 aaKnown RBP8.09□□□□□ -1.11
SOX6-216ENST00000533658 PCDHGA11Q9Y5H2 935 aa8.09□□□□□ -1.11
SOX6-216ENST00000533658 KDRP35968 1356 aa8.09□□□□□ -1.12
SOX6-216ENST00000533658 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 A0A0G2JLW4 131 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 EML1O00423 815 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 IL13P35225 146 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 MTHFSP49914 203 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 SLC39A6Q13433 755 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 PLEKHO1Q53GL0 409 aaPredicted RBP8.08□□□□□ -1.12
SOX6-216ENST00000533658 JMYQ8N9B5 988 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 ZDHHC1Q8WTX9 485 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 KNSTRNQ9Y448 316 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 GPC6Q9Y625 555 aaPredicted RBP8.08□□□□□ -1.12
SOX6-216ENST00000533658 WDR90Q96KV7 1748 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 KIF13BQ9NQT8 1826 aa8.08□□□□□ -1.12
SOX6-216ENST00000533658 UBE2OQ9C0C9 1292 aaKnown RBP8.07□□□□□ -1.12
SOX6-216ENST00000533658 NEUROD4Q9HD90 331 aa8.07□□□□□ -1.12
SOX6-216ENST00000533658 PLEKHG2Q9H7P9 1386 aa8.07□□□□□ -1.12
SOX6-216ENST00000533658 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 ATP9BO43861 1147 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 MED26O95402 600 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 GYS1P13807 737 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 DPEP1P16444 411 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 CRKLP46109 303 aaKnown RBP8.06□□□□□ -1.12
SOX6-216ENST00000533658 TGFB2P61812 414 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 TBC1D8BQ0IIM8 1120 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 C1orf141Q5JVX7 400 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 ARHGAP27Q6ZUM4 889 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 PLEKHM2Q8IWE5 1019 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 RTCBQ9Y3I0 505 aaKnown RBP8.06□□□□□ -1.12
SOX6-216ENST00000533658 KCPQ6ZWJ8 1503 aa8.06□□□□□ -1.12
SOX6-216ENST00000533658 N4BP2Q86UW6 1770 aaPredicted RBP8.06□□□□□ -1.12
SOX6-216ENST00000533658 ERVV-2B6SEH9 535 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 FSTL1Q12841 308 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 MTHFSDQ2M296 383 aaKnown RBP8.05□□□□□ -1.12
SOX6-216ENST00000533658 PSAPL1Q6NUJ1 521 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 FBXO11Q86XK2 927 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 DNAJC10Q8IXB1 793 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.05□□□□□ -1.12
SOX6-216ENST00000533658 ADAMTS19Q8TE59 1207 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 C4AP0C0L4 1744 aa8.05□□□□□ -1.12
SOX6-216ENST00000533658 RPS6KA4O75676 772 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 KCNA3P22001 575 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 CHRNA5P30532 468 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 RFC4P35249 363 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 DDR1Q08345 913 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 AMOTQ4VCS5 1084 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 INTS5Q6P9B9 1019 aaKnown RBP8.04□□□□□ -1.12
SOX6-216ENST00000533658 C16orf71Q8IYS4 520 aaPredicted RBP8.04□□□□□ -1.12
SOX6-216ENST00000533658 TNS4Q8IZW8 715 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 C7orf43Q8WVR3 580 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 GLMNQ92990 594 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 BHMTQ93088 406 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 ZNF358Q9NW07 568 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 NAGPAQ9UK23 515 aa8.04□□□□□ -1.12
SOX6-216ENST00000533658 BRCA1P38398 1863 aaKnown RBP8.04□□□□□ -1.12
SOX6-216ENST00000533658 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 U2SURPO15042 1029 aaKnown RBP8.03□□□□□ -1.12
SOX6-216ENST00000533658 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
SOX6-216ENST00000533658 PRELPP51888 382 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 TPCN2Q8NHX9 752 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 CALR3Q96L12 384 aaKnown RBP8.03□□□□□ -1.12
SOX6-216ENST00000533658 RNF181Q9P0P0 153 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 CHMP3Q9Y3E7 222 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 KDM2BQ8NHM5 1336 aa8.03□□□□□ -1.12
SOX6-216ENST00000533658 A6NJR5 290 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 HSP90AB1P08238 724 aaKnown RBP8.02□□□□□ -1.13
SOX6-216ENST00000533658 PIP4K2AP48426 406 aaPredicted RBP8.02□□□□□ -1.13
SOX6-216ENST00000533658 CCDC102BQ68D86 513 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 IGF2-ASQ6U949 168 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 UCN2Q96RP3 112 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 SLC52A2Q9HAB3 445 aa8.02□□□□□ -1.13
SOX6-216ENST00000533658 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
SOX6-216ENST00000533658 MKRN1Q9UHC7 482 aaKnown RBP8.02□□□□□ -1.13
SOX6-216ENST00000533658 KCNH4Q9UQ05 1017 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms