RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CTGFP29279 349 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 KIF22Q14807 665 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 FASTKD5Q7L8L6 764 aaKnown RBP13.84□□□□□ -0.19
CLCF1-202ENST00000533438 NBPF11Q86T75 865 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 PIH1D3Q9NQM4 214 aaKnown RBP13.84□□□□□ -0.19
CLCF1-202ENST00000533438 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
CLCF1-202ENST00000533438 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.84□□□□□ -0.19
CLCF1-202ENST00000533438 EXOC6BQ9Y2D4 811 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 MYH1P12882 1939 aa13.84□□□□□ -0.19
CLCF1-202ENST00000533438 BAG3O95817 575 aa13.83□□□□□ -0.2
CLCF1-202ENST00000533438 BCRP11274 1271 aa13.83□□□□□ -0.2
CLCF1-202ENST00000533438 PLCG2P16885 1265 aa13.83□□□□□ -0.2
CLCF1-202ENST00000533438 PARK7Q99497 189 aaKnown RBP13.83□□□□□ -0.2
CLCF1-202ENST00000533438 NOL10Q9BSC4 688 aaKnown RBP13.83□□□□□ -0.2
CLCF1-202ENST00000533438 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
CLCF1-202ENST00000533438 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
CLCF1-202ENST00000533438 KIAA0100Q14667 2235 aaKnown RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 CYP2C8P10632 490 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 PRMT2P55345 433 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 RRP1BQ14684 758 aaKnown RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 SLC9C1Q4G0N8 1177 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 CCDC84Q86UT8 332 aaPredicted RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 METTL16Q86W50 562 aaKnown RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 RHPN1Q8TCX5 695 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 HERC5Q9UII4 1024 aaKnown RBP13.82□□□□□ -0.2
CLCF1-202ENST00000533438 FLT1P17948 1338 aa13.82□□□□□ -0.2
CLCF1-202ENST00000533438 TRIM75PA6NK02 468 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 CAP2P40123 477 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 PSMC4P43686 418 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 HSP90AB4PQ58FF6 505 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 GADL1Q6ZQY3 521 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 AACSQ86V21 672 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 RPAP2Q8IXW5 612 aaPredicted RBP13.81□□□□□ -0.2
CLCF1-202ENST00000533438 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 TRIM47Q96LD4 638 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 TBC1D2Q9BYX2 928 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 ZBTB40Q9NUA8 1239 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 PI4KBQ9UBF8 816 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 DDX19BQ9UMR2 479 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
CLCF1-202ENST00000533438 DDX60LQ5H9U9 1706 aaKnown RBP13.81□□□□□ -0.2
CLCF1-202ENST00000533438 RANBP2P49792 3224 aaKnown RBP13.8□□□□□ -0.2
CLCF1-202ENST00000533438 OSBPP22059 807 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 MAPKAPK5Q8IW41 473 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 ANTXR1Q9H6X2 564 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 DNAJC18Q9H819 358 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 SRRDQ9UH36 339 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 AGTPBP1Q9UPW5 1226 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 COLQQ9Y215 455 aaPredicted RBP13.8□□□□□ -0.2
CLCF1-202ENST00000533438 SZT2Q5T011 3432 aa13.8□□□□□ -0.2
CLCF1-202ENST00000533438 IDH1O75874 414 aaKnown RBP13.79□□□□□ -0.2
CLCF1-202ENST00000533438 CYP7A1P22680 504 aa13.79□□□□□ -0.2
CLCF1-202ENST00000533438 DYNLL1P63167 89 aaKnown RBP13.79□□□□□ -0.2
CLCF1-202ENST00000533438 TMED8Q6PL24 325 aaPredicted RBP13.79□□□□□ -0.2
CLCF1-202ENST00000533438 PROCA1Q8NCQ7 364 aaPredicted RBP13.79□□□□□ -0.2
CLCF1-202ENST00000533438 ZNF280CQ8ND82 737 aa13.79□□□□□ -0.2
CLCF1-202ENST00000533438 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
CLCF1-202ENST00000533438 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
CLCF1-202ENST00000533438 USP17L5A8MUK1 530 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 ECM2O94769 699 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-202ENST00000533438 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-202ENST00000533438 HOXD10P28358 340 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 SPP2Q13103 211 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 SH3D19Q5HYK7 790 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 TREML2Q5T2D2 321 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 FOXP4Q8IVH2 680 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-202ENST00000533438 MAGEB6Q8N7X4 407 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 KIF1BPQ96EK5 621 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 PALD1Q9ULE6 856 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 DOCK3Q8IZD9 2030 aa13.78□□□□□ -0.2
CLCF1-202ENST00000533438 HMMRO75330 724 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 FCGRTP55899 365 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 JAG1P78504 1218 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 MAP3K12Q12852 859 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 UBE2Q1Q7Z7E8 422 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 CLASRPQ8N2M8 674 aaKnown RBP13.77□□□□□ -0.21
CLCF1-202ENST00000533438 MIGA1Q8NAN2 632 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLCF1-202ENST00000533438 WDR18Q9BV38 432 aa13.77□□□□□ -0.21
CLCF1-202ENST00000533438 ASNSP08243 561 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 HMGCS2P54868 508 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 PRKCZQ05513 592 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
CLCF1-202ENST00000533438 PRO3102Q9H379 93 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
CLCF1-202ENST00000533438 AS3MTQ9HBK9 375 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
CLCF1-202ENST00000533438 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 GABRQQ9UN88 632 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 MYH7P12883 1935 aa13.76□□□□□ -0.21
CLCF1-202ENST00000533438 RAB11FIP3O75154 756 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms