RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■□□□ 13.3
SF3B2-213ENST00000533421 BOLA2Q9H3K6 86 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
SF3B2-213ENST00000533421 KCNH4Q9UQ05 1017 aa14.81□□□□□ -0.04
SF3B2-213ENST00000533421 PHF20L1A8MW92 1017 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 USP5P45974 858 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 SP3Q02447 781 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 KIF22Q14807 665 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 SH3BP5LQ7L8J4 393 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 ANKRD23Q86SG2 305 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 SMC5Q8IY18 1101 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 CRACR2BQ8N4Y2 399 aaPredicted RBP14.8□□□□□ -0.04
SF3B2-213ENST00000533421 TGFBRAP1Q8WUH2 860 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 GCC1Q96CN9 775 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 PTPN18Q99952 460 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 DOCK1Q14185 1865 aa14.8□□□□□ -0.04
SF3B2-213ENST00000533421 FLT1P17948 1338 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 PTPRAP18433 802 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 ATP5JP18859 108 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 ZSCAN25Q6NSZ9 544 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-213ENST00000533421 SKAP1Q86WV1 359 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 FOXP4Q8IVH2 680 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-213ENST00000533421 GINM1Q9NU53 330 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 ZHX2Q9Y6X8 837 aa14.79□□□□□ -0.04
SF3B2-213ENST00000533421 TNRC18O15417 2968 aaPredicted RBP14.79□□□□□ -0.04
SF3B2-213ENST00000533421 FOCADQ5VW36 1801 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 BTBD19C9JJ37 291 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 GOLIM4O00461 696 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 SLC9C2Q5TAH2 1124 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 MAPKAPK5Q8IW41 473 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 FAM43AQ8N2R8 423 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 PARK7Q99497 189 aaKnown RBP14.78□□□□□ -0.04
SF3B2-213ENST00000533421 AS3MTQ9HBK9 375 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 PAG1Q9NWQ8 432 aa14.78□□□□□ -0.04
SF3B2-213ENST00000533421 MAGEB6P1A0A0J9YX57 407 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 TLR2O60603 784 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 CHGBP05060 677 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 SLFNL1Q499Z3 407 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 ADGRA1Q86SQ6 560 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 TTC6Q86TZ1 520 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 MIGA1Q8NAN2 632 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 CRNKL1Q9BZJ0 848 aaKnown RBP14.77□□□□□ -0.05
SF3B2-213ENST00000533421 TRIM17Q9Y577 477 aa14.77□□□□□ -0.05
SF3B2-213ENST00000533421 A0A0G2JLL6 359 aaPredicted RBP14.76□□□□□ -0.05
SF3B2-213ENST00000533421 PDHXO00330 501 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 GNRH1P01148 92 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 ASNSP08243 561 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 PDE6AP16499 860 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 CAP2P40123 477 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 NUCB1Q02818 461 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 LRRFIP1Q32MZ4 808 aaKnown RBP14.76□□□□□ -0.05
SF3B2-213ENST00000533421 PRRT2Q7Z6L0 340 aaPredicted RBP14.76□□□□□ -0.05
SF3B2-213ENST00000533421 CHD1LQ86WJ1 897 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 HAUS7Q99871 368 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 R3HDMLQ9H3Y0 253 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 EFCC1Q9HA90 598 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 ECHDC1Q9NTX5 307 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 SLC45A1Q9Y2W3 748 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 AFG3L2Q9Y4W6 797 aa14.76□□□□□ -0.05
SF3B2-213ENST00000533421 SALL3Q9BXA9 1300 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 MYH7P12883 1935 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 USP17L5A8MUK1 530 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 MX1P20591 662 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 PDE4AP27815 886 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 DYNLL1P63167 89 aaKnown RBP14.75□□□□□ -0.05
SF3B2-213ENST00000533421 PABPC4Q13310 644 aaKnown RBP eCLIP14.75□□□□□ -0.05
SF3B2-213ENST00000533421 GADL1Q6ZQY3 521 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 PNMA3Q9UL41 463 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 TAOK2Q9UL54 1235 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 PALD1Q9ULE6 856 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 CDK5RAP2Q96SN8 1893 aa14.75□□□□□ -0.05
SF3B2-213ENST00000533421 ZNF532Q9HCE3 1301 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 TRIM75PA6NK02 468 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 ERC2O15083 957 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 OTOP1Q7RTM1 612 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 METTL16Q86W50 562 aaKnown RBP14.74□□□□□ -0.05
SF3B2-213ENST00000533421 PROCA1Q8NCQ7 364 aaPredicted RBP14.74□□□□□ -0.05
SF3B2-213ENST00000533421 ZNF280CQ8ND82 737 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 PI4K2BQ8TCG2 481 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 EHD4Q9H223 541 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 SAP30BPQ9UHR5 308 aaKnown RBP14.74□□□□□ -0.05
SF3B2-213ENST00000533421 SERPINB13Q9UIV8 391 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 HPS5Q9UPZ3 1129 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 MYH1P12882 1939 aa14.74□□□□□ -0.05
SF3B2-213ENST00000533421 ATAD5Q96QE3 1844 aa14.73□□□□□ -0.05
SF3B2-213ENST00000533421 FAM196BA6NMK8 535 aa14.73□□□□□ -0.05
SF3B2-213ENST00000533421 POLR3DP05423 398 aaPredicted RBP14.73□□□□□ -0.05
SF3B2-213ENST00000533421 HOXD10P28358 340 aa14.73□□□□□ -0.05
SF3B2-213ENST00000533421 PRMT2P55345 433 aa14.73□□□□□ -0.05
SF3B2-213ENST00000533421 TTC41PQ6P2S7 1318 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 ADD2P35612 726 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 PDE1AP54750 535 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 UBE3CQ15386 1083 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 SMCR8Q8TEV9 937 aaPredicted RBP14.72□□□□□ -0.05
SF3B2-213ENST00000533421 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
SF3B2-213ENST00000533421 RIOK1Q9BRS2 568 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms