RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 ZSCAN10Q96SZ4 725 aaPredicted RBP25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 MYL10Q9BUA6 226 aa25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 MKRN1Q9UHC7 482 aaKnown RBP25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 NID2Q14112 1375 aa25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 DLEC1Q9Y238 1755 aa25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 USP17L8P0C7I0 530 aa25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 FAM173BQ6P4H8 233 aa25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 SCAND2PQ9GZW5 306 aaPredicted RBP25.49■■□□□ 1.67
AP004608.1-202ENST00000533390 GAKO14976 1311 aa25.48■■□□□ 1.67
AP004608.1-202ENST00000533390 CYP2D6P10635 497 aa25.48■■□□□ 1.67
AP004608.1-202ENST00000533390 SEC23AQ15436 765 aa25.48■■□□□ 1.67
AP004608.1-202ENST00000533390 C12orf60Q5U649 245 aa25.48■■□□□ 1.67
AP004608.1-202ENST00000533390 NT5C2P49902 561 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 CCDC196A0A1B0GTZ2 297 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 FSD2A1L4K1 749 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 IARSP41252 1262 aaKnown RBP25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 GUCY1B3Q02153 619 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 RTN1Q16799 776 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 ZSCAN23Q3MJ62 389 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 PODNQ7Z5L7 613 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 TEX11Q8IYF3 940 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 ZNF654Q8IZM8 581 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 RGS22Q8NE09 1264 aa25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 RBM27Q9P2N5 1060 aaKnown RBP25.47■■□□□ 1.67
AP004608.1-202ENST00000533390 IFIT1BQ5T764 474 aaKnown RBP25.46■■□□□ 1.67
AP004608.1-202ENST00000533390 SLC16A10Q8TF71 515 aa25.46■■□□□ 1.67
AP004608.1-202ENST00000533390 ZNF219Q9P2Y4 722 aaPredicted RBP25.46■■□□□ 1.67
AP004608.1-202ENST00000533390 ELP1O95163 1332 aa25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 NTRK3Q16288 839 aa25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 MAPKAPK5Q8IW41 473 aa25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 ENAHQ8N8S7 591 aaPredicted RBP25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 FAM217BQ9NTX9 383 aaPredicted RBP25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 TMEM63CQ9P1W3 806 aa25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 CFAP45Q9UL16 551 aa25.45■■□□□ 1.67
AP004608.1-202ENST00000533390 ECM29Q5VYK3 1845 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 POLR3DP05423 398 aaPredicted RBP25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 EVX2Q03828 476 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 PPP2R5BQ15173 497 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 CC2D2BQ6DHV5 1058 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 FBXO18Q8NFZ0 1043 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 NUP133Q8WUM0 1156 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 SPATA32Q96LK8 384 aa25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 PDGFDQ9GZP0 370 aaPredicted RBP25.45■■□□□ 1.66
AP004608.1-202ENST00000533390 MYH1P12882 1939 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 ROBO3Q96MS0 1386 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 TSPY2A6NKD2 308 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 ZNF445P59923 1031 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 SSRP1Q08945 709 aaKnown RBP25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 SLC4A8Q2Y0W8 1093 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 TTC6Q86TZ1 520 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 TFIP11Q9UBB9 837 aaKnown RBP25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 FOCADQ5VW36 1801 aa25.44■■□□□ 1.66
AP004608.1-202ENST00000533390 STK36Q9NRP7 1315 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 C10orf71Q711Q0 1435 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 PHKBQ93100 1093 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 ALG1Q9BT22 464 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 DBNDD1Q9H9R9 158 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 TTF2Q9UNY4 1162 aaKnown RBP25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 DAGLAQ9Y4D2 1042 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 IFNAR1P17181 557 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 ATL3Q6DD88 541 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 CATIPQ7Z7H3 387 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 FANCBQ8NB91 859 aa25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 ZNF396Q96N95 335 aaPredicted RBP25.43■■□□□ 1.66
AP004608.1-202ENST00000533390 F8W031 263 aaPredicted RBP25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 RHBDL3P58872 404 aa25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 TRIM22Q8IYM9 498 aa25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 CERS5Q8N5B7 392 aa25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 WASF1Q92558 559 aa25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 MKNK2Q9HBH9 465 aa25.42■■□□□ 1.66
AP004608.1-202ENST00000533390 DDX60LQ5H9U9 1706 aaKnown RBP25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 FMNL1O95466 1100 aaPredicted RBP25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 CALM1P0DP23 149 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 CALM2P0DP24 149 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 CALM3P0DP25 149 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 TPRNQ4KMQ1 711 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 FAM47AQ5JRC9 791 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 SUPT20HQ8NEM7 779 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 SLC26A6Q9BXS9 759 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 ZNF287Q9HBT7 754 aa25.41■■□□□ 1.66
AP004608.1-202ENST00000533390 OTUD7BQ6GQQ9 843 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 LEO1Q8WVC0 666 aaPredicted RBP25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 SAP30BPQ9UHR5 308 aaKnown RBP25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 FLT1P17948 1338 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 GOLGA6L4A6NEF3 574 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 MRE11P49959 708 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 TRIM29Q14134 588 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 C7orf43Q8WVR3 580 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 DYNLL2Q96FJ2 89 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 MYH6P13533 1939 aa25.4■■□□□ 1.66
AP004608.1-202ENST00000533390 CCDC125Q86Z20 511 aa25.39■■□□□ 1.66
AP004608.1-202ENST00000533390 ECE2O60344 883 aa25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 DDAH1O94760 285 aa25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 CCDC178Q5BJE1 867 aa25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 BRAPQ7Z569 592 aa25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 ZNF444Q8N0Y2 327 aaPredicted RBP25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 RBM28Q9NW13 759 aaKnown RBP25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 PLCD1P51178 756 aa25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 FKBP1AP62942 108 aaKnown RBP25.38■■□□□ 1.65
AP004608.1-202ENST00000533390 TFAP4Q01664 338 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms