RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
CTSB-227ENST00000533110 MORF4L1Q9UBU8 362 aa11.55□□□□□ -0.56
CTSB-227ENST00000533110 MAPK4P31152 587 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 RTP1P59025 263 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 PICALMQ13492 652 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 C9orf50Q5SZB4 431 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 GPRC5AQ8NFJ5 357 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 APBA2Q99767 749 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 ATP11BQ9Y2G3 1177 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 PTPRFP10586 1907 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 MAST2Q6P0Q8 1798 aa11.54□□□□□ -0.56
CTSB-227ENST00000533110 DDTLA6NHG4 134 aaPredicted RBP11.53□□□□□ -0.56
CTSB-227ENST00000533110 MSCO60682 206 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 MAP3K10Q02779 954 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
CTSB-227ENST00000533110 IL27Q8NEV9 243 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 LPIN2Q92539 896 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 SRCIN1Q9C0H9 1055 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 OSBPL5Q9H0X9 879 aaPredicted RBP11.53□□□□□ -0.56
CTSB-227ENST00000533110 BICC1Q9H694 974 aaKnown RBP11.53□□□□□ -0.56
CTSB-227ENST00000533110 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTSB-227ENST00000533110 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 GNL3LQ9NVN8 582 aaKnown RBP11.53□□□□□ -0.56
CTSB-227ENST00000533110 PRUNE2Q8WUY3 3088 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
CTSB-227ENST00000533110 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.56
CTSB-227ENST00000533110 LAMA2P24043 3122 aaKnown RBP11.52□□□□□ -0.56
CTSB-227ENST00000533110 LOC285556D6RIA3 1793 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 DNM1LO00429 736 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 CCL14Q16627 93 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 MFSD14CQ5VZR4 134 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 SLF2Q8IX21 1173 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 MUC3AQ02505 3323 aa11.52□□□□□ -0.57
CTSB-227ENST00000533110 CDH23Q9H251 3354 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 USP17L5A8MUK1 530 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 TBC1D12O60347 775 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 FGFR2P21802 821 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 CNGA1P29973 690 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 HERVK_113P62684 666 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 MAP3K12Q12852 859 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 RABL6Q3YEC7 729 aaPredicted RBP11.51□□□□□ -0.57
CTSB-227ENST00000533110 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 ZGPATQ8N5A5 531 aaKnown RBP11.51□□□□□ -0.57
CTSB-227ENST00000533110 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 LPAR1Q92633 364 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 BADQ92934 168 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 KAZALD1Q96I82 304 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 RNPC3Q96LT9 517 aaKnown RBP11.51□□□□□ -0.57
CTSB-227ENST00000533110 DDX4Q9NQI0 724 aaKnown RBP11.51□□□□□ -0.57
CTSB-227ENST00000533110 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
CTSB-227ENST00000533110 IL16Q14005 1332 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 SALL1Q9NSC2 1324 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 FANCIQ9NVI1 1328 aa11.51□□□□□ -0.57
CTSB-227ENST00000533110 NBPF7P0C2Y1 421 aaPredicted RBP11.5□□□□□ -0.57
CTSB-227ENST00000533110 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
CTSB-227ENST00000533110 MTMR2Q13614 643 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 NCBP3Q53F19 620 aaKnown RBP11.5□□□□□ -0.57
CTSB-227ENST00000533110 SH3D19Q5HYK7 790 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 KLHDC4Q8TBB5 520 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
CTSB-227ENST00000533110 ATXN2LQ8WWM7 1075 aaKnown RBP11.5□□□□□ -0.57
CTSB-227ENST00000533110 PAGR1Q9BTK6 254 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 PHIPQ8WWQ0 1821 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 GAKO14976 1311 aa11.5□□□□□ -0.57
CTSB-227ENST00000533110 PLXNB2O15031 1838 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 MYH13Q9UKX3 1938 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 KBTBD13C9JR72 458 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 SEMA3EO15041 775 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 VAMP4O75379 141 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 GLRX3O76003 335 aaKnown RBP11.49□□□□□ -0.57
CTSB-227ENST00000533110 CAP2P40123 477 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 BTDP43251 543 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 ERVK-9P63128 1117 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 ERVK-24P63145 666 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 MORN1Q5T089 497 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 ADAMTS19Q8TE59 1207 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 USP6NLQ92738 828 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 P2RX7Q99572 595 aaKnown RBP11.49□□□□□ -0.57
CTSB-227ENST00000533110 TXNRD2Q9NNW7 524 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 THEGQ9P2T0 379 aa11.49□□□□□ -0.57
CTSB-227ENST00000533110 PEX10O60683 326 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
CTSB-227ENST00000533110 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
CTSB-227ENST00000533110 MAP2K5Q13163 448 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 GRIN2CQ14957 1233 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 TRIM60Q495X7 471 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 WDR78Q5VTH9 848 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 ANKRD44Q8N8A2 993 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
CTSB-227ENST00000533110 PPM1EQ8WY54 764 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms