RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SYT1P21579 422 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 RXRBP28702 533 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 PLCB3Q01970 1234 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 C6orf163Q5TEZ5 329 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 HSF2BPO75031 334 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 TFAP4Q01664 338 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 CEP135Q66GS9 1140 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 OTUD6BQ8N6M0 293 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 ZBTB9Q96C00 473 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 ZBED4O75132 1171 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 MAPK8IP1Q9UQF2 711 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 GINS2Q9Y248 185 aa16.6■□□□□ 0.25
PCDHA9-202ENST00000532602 WDR44Q5JSH3 913 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 CCDC169A6NNP5 214 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 TYRO3Q06418 890 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 FAM196AQ6ZSG2 479 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 PUS3Q9BZE2 481 aaKnown RBP16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 NOP56O00567 594 aaKnown RBP16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 SKILP12757 684 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 MAP3K15Q6ZN16 1313 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 BLMP54132 1417 aaPredicted RBP16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 GSTA5Q7RTV2 222 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 STMN4Q9H169 189 aaPredicted RBP16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 ZBTB1Q9Y2K1 713 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 MYOM2P54296 1465 aa16.59■□□□□ 0.25
PCDHA9-202ENST00000532602 EXOC7Q9UPT5 735 aa16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 ATP6V0A2Q9Y487 856 aa16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 SGSM2O43147 1006 aa16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 PPARAQ07869 468 aa16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.58■□□□□ 0.25
PCDHA9-202ENST00000532602 CFBP00751 764 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 PLEKHF1Q96S99 279 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 LZTS2Q9BRK4 669 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 ARL1P40616 181 aaPredicted RBP16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 BIRC3Q13489 604 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 TNFAIP1Q13829 316 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 CARD10Q9BWT7 1032 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 PRR36Q9H6K5 1346 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 H7C1D1 291 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
PCDHA9-202ENST00000532602 AOX1Q06278 1338 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 EPB41P11171 864 aaKnown RBP16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 RAD51AP2Q09MP3 1159 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 E7EWF7 191 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 ERCC3P19447 782 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 ADORA1P30542 326 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 BEND3Q5T5X7 828 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 RNF187Q5TA31 235 aaPredicted RBP16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 NSMFQ6X4W1 530 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 TBC1D7Q9P0N9 293 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 IBTKQ9P2D0 1353 aaPredicted RBP16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 STX10O60499 249 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 TEKT1Q969V4 418 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 NDC80O14777 642 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 LUC7L2Q9Y383 392 aaKnown RBP16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 USP6P35125 1406 aa16.57■□□□□ 0.24
PCDHA9-202ENST00000532602 TUBB4BP68371 445 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 RAPGEF1Q13905 1077 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 KIFAP3Q92845 792 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 FAM170AA1A519 330 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 USP17L12C9JPN9 530 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 USP17L21D6R901 530 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 PPEF1O14829 653 aaPredicted RBP16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 JAK2O60674 1132 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 SNX16P57768 344 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 STRN3Q13033 797 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 KRT27Q7Z3Y8 459 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 ELP1O95163 1332 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 RAB3IL1Q8TBN0 382 aa16.56■□□□□ 0.24
PCDHA9-202ENST00000532602 POLR3GO15318 223 aaPredicted RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 BMS1Q14692 1282 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 GPIHBP1Q8IV16 184 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 CDAN1Q8IWY9 1227 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 SRRTQ9BXP5 876 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 TXNDC16Q9P2K2 825 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 A0A0D9SFI3 127 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 ATP2A2P16615 1042 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 ADCY7P51828 1080 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 ATF5Q9Y2D1 282 aaPredicted RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 TRAF5O00463 557 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 LRRC47Q8N1G4 583 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 ARHGEF35A5YM69 484 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 VWA3BQ502W6 1294 aa16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 LLPHQ9BRT6 129 aaKnown RBP16.55■□□□□ 0.24
PCDHA9-202ENST00000532602 IFNKQ9P0W0 207 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms