RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 BAG3O95817 575 aa23.14■■□□□ 1.29
SSH3-209ENST00000532600 MAPKAPK5Q8IW41 473 aa23.14■■□□□ 1.29
SSH3-209ENST00000532600 TGFBRAP1Q8WUH2 860 aa23.14■■□□□ 1.29
SSH3-209ENST00000532600 DNAJC18Q9H819 358 aa23.14■■□□□ 1.29
SSH3-209ENST00000532600 CENPFP49454 3210 aa23.14■■□□□ 1.29
SSH3-209ENST00000532600 APBB1O00213 710 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 IGSF3O75054 1194 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 IDH1O75874 414 aaKnown RBP23.13■■□□□ 1.29
SSH3-209ENST00000532600 CYP2C8P10632 490 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 CYP7A1P22680 504 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
SSH3-209ENST00000532600 JAG1P78504 1218 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 HSP90AB4PQ58FF6 505 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 ARMC5Q96C12 935 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 PTCH2Q9Y6C5 1203 aa23.13■■□□□ 1.29
SSH3-209ENST00000532600 PLCG2P16885 1265 aa23.12■■□□□ 1.29
SSH3-209ENST00000532600 NOL10Q9BSC4 688 aaKnown RBP23.12■■□□□ 1.29
SSH3-209ENST00000532600 TRIM75PA6NK02 468 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 CAP2P40123 477 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 PDE3AQ14432 1141 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 SHROOM1Q2M3G4 852 aaPredicted RBP23.11■■□□□ 1.29
SSH3-209ENST00000532600 METTL16Q86W50 562 aaKnown RBP23.11■■□□□ 1.29
SSH3-209ENST00000532600 MAGEB6Q8N7X4 407 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 MIGA1Q8NAN2 632 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 KIF1BPQ96EK5 621 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 PALD1Q9ULE6 856 aa23.11■■□□□ 1.29
SSH3-209ENST00000532600 RBBP6Q7Z6E9 1792 aaKnown RBP23.11■■□□□ 1.29
SSH3-209ENST00000532600 LOC285556D6RIA3 1793 aa23.1■■□□□ 1.29
SSH3-209ENST00000532600 POTEFA5A3E0 1075 aa23.1■■□□□ 1.29
SSH3-209ENST00000532600 ECM2O94769 699 aaPredicted RBP23.1■■□□□ 1.29
SSH3-209ENST00000532600 BCRP11274 1271 aa23.1■■□□□ 1.29
SSH3-209ENST00000532600 GADL1Q6ZQY3 521 aa23.1■■□□□ 1.29
SSH3-209ENST00000532600 FASTKD5Q7L8L6 764 aaKnown RBP23.1■■□□□ 1.29
SSH3-209ENST00000532600 PI4KBQ9UBF8 816 aa23.1■■□□□ 1.29
SSH3-209ENST00000532600 HERC5Q9UII4 1024 aaKnown RBP23.1■■□□□ 1.29
SSH3-209ENST00000532600 HMMRO75330 724 aa23.09■■□□□ 1.29
SSH3-209ENST00000532600 TRIM47Q96LD4 638 aa23.09■■□□□ 1.29
SSH3-209ENST00000532600 PARK7Q99497 189 aaKnown RBP23.09■■□□□ 1.29
SSH3-209ENST00000532600 DHX36Q9H2U1 1008 aaKnown RBP23.09■■□□□ 1.29
SSH3-209ENST00000532600 SAP30BPQ9UHR5 308 aaKnown RBP23.09■■□□□ 1.29
SSH3-209ENST00000532600 TREML2Q5T2D2 321 aa23.08■■□□□ 1.29
SSH3-209ENST00000532600 CLASRPQ8N2M8 674 aaKnown RBP23.08■■□□□ 1.29
SSH3-209ENST00000532600 MYH1P12882 1939 aa23.08■■□□□ 1.28
SSH3-209ENST00000532600 RAB11FIP3O75154 756 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 SPP2Q13103 211 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 SLC4A8Q2Y0W8 1093 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 EDC3Q96F86 508 aaKnown RBP23.07■■□□□ 1.28
SSH3-209ENST00000532600 ZNF333Q96JL9 665 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 RIOK1Q9BRS2 568 aaKnown RBP23.07■■□□□ 1.28
SSH3-209ENST00000532600 SLC45A1Q9Y2W3 748 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 DDX60LQ5H9U9 1706 aaKnown RBP23.07■■□□□ 1.28
SSH3-209ENST00000532600 PDE4DIPQ5VU43 2346 aa23.07■■□□□ 1.28
SSH3-209ENST00000532600 PSMC4P43686 418 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 MAP3K12Q12852 859 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 KIF22Q14807 665 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 ARHGEF6Q15052 776 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 ZNF280CQ8ND82 737 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.06■■□□□ 1.28
SSH3-209ENST00000532600 AGTPBP1Q9UPW5 1226 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 MGAMO43451 1857 aa23.06■■□□□ 1.28
SSH3-209ENST00000532600 BRCA2P51587 3418 aa23.05■■□□□ 1.28
SSH3-209ENST00000532600 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
SSH3-209ENST00000532600 OSBPP22059 807 aa23.05■■□□□ 1.28
SSH3-209ENST00000532600 FOXP4Q8IVH2 680 aaPredicted RBP23.05■■□□□ 1.28
SSH3-209ENST00000532600 KIAA0100Q14667 2235 aaKnown RBP23.05■■□□□ 1.28
SSH3-209ENST00000532600 TCRBV5S4A2TA0A5A2 114 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 USP17L5A8MUK1 530 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 GNRH1P01148 92 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 PDE6AP16499 860 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 HMGCS2P54868 508 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 SH3TC2Q8TF17 1288 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 BCL11AQ9H165 835 aa23.04■■□□□ 1.28
SSH3-209ENST00000532600 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
SSH3-209ENST00000532600 GOLIM4O00461 696 aa23.03■■□□□ 1.28
SSH3-209ENST00000532600 GDF11O95390 407 aa23.03■■□□□ 1.28
SSH3-209ENST00000532600 SLC9C1Q4G0N8 1177 aa23.03■■□□□ 1.28
SSH3-209ENST00000532600 SH3D19Q5HYK7 790 aa23.03■■□□□ 1.28
SSH3-209ENST00000532600 PROCA1Q8NCQ7 364 aaPredicted RBP23.03■■□□□ 1.28
SSH3-209ENST00000532600 DNAJC2Q99543 621 aaKnown RBP23.03■■□□□ 1.28
SSH3-209ENST00000532600 SRRDQ9UH36 339 aa23.03■■□□□ 1.28
SSH3-209ENST00000532600 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
SSH3-209ENST00000532600 SMARCA5O60264 1052 aaPredicted RBP23.02■■□□□ 1.28
SSH3-209ENST00000532600 EN2P19622 333 aaPredicted RBP23.02■■□□□ 1.28
SSH3-209ENST00000532600 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
SSH3-209ENST00000532600 SLFNL1Q499Z3 407 aa23.02■■□□□ 1.28
SSH3-209ENST00000532600 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
SSH3-209ENST00000532600 TMED8Q6PL24 325 aaPredicted RBP23.02■■□□□ 1.28
SSH3-209ENST00000532600 WDR18Q9BV38 432 aa23.02■■□□□ 1.28
SSH3-209ENST00000532600 FMNL1O95466 1100 aaPredicted RBP23.01■■□□□ 1.27
SSH3-209ENST00000532600 CHGBP05060 677 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 USP5P45974 858 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 EVX2Q03828 476 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 CRACR2BQ8N4Y2 399 aaPredicted RBP23.01■■□□□ 1.27
SSH3-209ENST00000532600 TBC1D2Q9BYX2 928 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 BOLA2Q9H3K6 86 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 ZNF532Q9HCE3 1301 aa23.01■■□□□ 1.27
SSH3-209ENST00000532600 NAV1Q8NEY1 1877 aa23■■□□□ 1.27
SSH3-209ENST00000532600 ATP5JP18859 108 aa23■■□□□ 1.27
SSH3-209ENST00000532600 PRMT2P55345 433 aa23■■□□□ 1.27
SSH3-209ENST00000532600 CERS3Q8IU89 383 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms