RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 NEFHP12036 1026 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 PFKFB1P16118 471 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 GYG1P46976 350 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 IFI16Q16666 785 aaKnown RBP17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 CCT6AP40227 531 aaKnown RBP17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 DLC1Q96QB1 1528 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 AXIN2Q9Y2T1 843 aa17.29■□□□□ 0.36
PCDHA3-202ENST00000532566 hCG_1642624A0A1W2PR95 340 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 TFAP4Q01664 338 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 FANCBQ8NB91 859 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 GOLGA1Q92805 767 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 CCDC172P0C7W6 258 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 SV2BQ7L1I2 683 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 NSUN7Q8NE18 718 aaKnown RBP17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 ARPP21Q9UBL0 812 aaPredicted RBP17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 CTNND2Q9UQB3 1225 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 SYNRGQ9UMZ2 1314 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 TERF1P54274 439 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 CHRNDQ07001 517 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
PCDHA3-202ENST00000532566 CMA1P23946 247 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 TNKSO95271 1327 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 H7C1W4 665 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 LARGE1O95461 756 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 ZNF569Q5MCW4 686 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 NAP1L4Q99733 375 aaKnown RBP17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 GUCA1BQ9UMX6 200 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 MED23Q9ULK4 1368 aa17.27■□□□□ 0.36
PCDHA3-202ENST00000532566 SEPT7Q16181 437 aaKnown RBP17.27■□□□□ 0.35
PCDHA3-202ENST00000532566 DRC1Q96MC2 740 aa17.27■□□□□ 0.35
PCDHA3-202ENST00000532566 VPS16Q9H269 839 aa17.27■□□□□ 0.35
PCDHA3-202ENST00000532566 GPCPD1Q9NPB8 672 aa17.27■□□□□ 0.35
PCDHA3-202ENST00000532566 NLRP10Q86W26 655 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 TUBB4BP68371 445 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 EPHA10Q5JZY3 1008 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 NEK11Q8NG66 645 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 ZNF500O60304 480 aaPredicted RBP17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 CRKLP46109 303 aaKnown RBP17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 PDE4DQ08499 809 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 PRPF4BQ13523 1007 aaKnown RBP17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 NONOQ15233 471 aaKnown RBP eCLIP17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 FAM47AQ5JRC9 791 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 LZTS2Q9BRK4 669 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 NRXN1Q9ULB1 1477 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 SHTN1A0MZ66 631 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 DESP17661 470 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 CTR9Q6PD62 1173 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
PCDHA3-202ENST00000532566 RIOK3O14730 519 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 MYRIPQ8NFW9 859 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 XPO4Q9C0E2 1151 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 MAPK8IP1Q9UQF2 711 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 SPATA31A3Q5VYP0 1347 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 ARID4AP29374 1257 aaPredicted RBP17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 IFFO1Q0D2I5 559 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 TBC1D8BQ0IIM8 1120 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 UBE4AQ14139 1066 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 ZSCAN10Q96SZ4 725 aaPredicted RBP17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 IQSEC2Q5JU85 1478 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 MYO3AQ8NEV4 1616 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 PAK1Q13153 545 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 TRIM14Q14142 442 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 APOA5Q6Q788 366 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 TBC1D22AQ8WUA7 517 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 M0R2C6 588 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 PNOCQ13519 176 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 WDR78Q5VTH9 848 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 TGFBRAP1Q8WUH2 860 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 RTEL1Q9NZ71 1219 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 SERTAD1Q9UHV2 236 aa17.25■□□□□ 0.35
PCDHA3-202ENST00000532566 CRB1P82279 1406 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 A0A1W2PQ27 194 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 A0A1W2PQ64 194 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 A0A1W2PQD8 194 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 ARHGAP6O43182 974 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 ADD2P35612 726 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 MCM6Q14566 821 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CCDC174Q6PII3 467 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CCNT1O60563 726 aaKnown RBP17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 KRT13P13646 458 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 HS2ST1Q7LGA3 356 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 PI16Q6UXB8 463 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 CCDC65Q8IXS2 484 aa17.24■□□□□ 0.35
PCDHA3-202ENST00000532566 GTF2F1P35269 517 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHA3-202ENST00000532566 TXKP42681 527 aa17.23■□□□□ 0.35
PCDHA3-202ENST00000532566 ARID5AQ03989 594 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms