RNA–Protein interactions for RNA: ENST00000532171.5

CAPN11-204, Transcript of calpain 11, human

TSL 4

Gene CAPN11, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN11-204	ENST00000532171	PALD1	Q9ULE6	856 aa		13.83	□□□□□ -0.2
CAPN11-204	ENST00000532171	MYH1	P12882	1939 aa		13.83	□□□□□ -0.2
CAPN11-204	ENST00000532171	MANSC4	A6NHS7	340 aa	Predicted RBP	13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	RNF113A	O15541	343 aa	Known RBP	13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	HLA-DOA	P06340	250 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	CTCF	P49711	727 aa	Predicted RBP	13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	METTL16	Q86W50	562 aa	Known RBP	13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	PLEKHM2	Q8IWE5	1019 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	SCYL3	Q8IZE3	742 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	SDR42E1	Q8WUS8	393 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	PUS7L	Q9H0K6	701 aa	Known RBP	13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	OSBPL3	Q9H4L5	887 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	DNAJC18	Q9H819	358 aa		13.82	□□□□□ -0.2
CAPN11-204	ENST00000532171	CTNND1	O60716	968 aa	Known RBP	13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	HSPA8	P11142	646 aa	Known RBP	13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	TM4SF4	P48230	202 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	PPIL2	Q13356	520 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	SLC4A8	Q2Y0W8	1093 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	OSBP2	Q969R2	916 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	EVI5L	Q96CN4	794 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	EHD4	Q9H223	541 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	SAGE1	Q9NXZ1	904 aa		13.81	□□□□□ -0.2
CAPN11-204	ENST00000532171	PRKAB2	O43741	272 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	CENPB	P07199	599 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	PPAT	Q06203	517 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	TRIM34	Q9BYJ4	488 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	PICK1	Q9NRD5	415 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	ATP8A2	Q9NTI2	1148 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	RNF186	Q9NXI6	227 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	MCM9	Q9NXL9	1143 aa		13.8	□□□□□ -0.2
CAPN11-204	ENST00000532171	ATAD5	Q96QE3	1844 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	TESPA1	A2RU30	521 aa	Predicted RBP	13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171		M0R2C6	588 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	IRF6	O14896	467 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	GPAA1	O43292	621 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	PTPRA	P18433	802 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	PDE4A	P27815	886 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	GTF2A2	P52657	109 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	INHBE	P58166	350 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	TTC6	Q86TZ1	520 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	MS4A4A	Q96JQ5	239 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	STRBP	Q96SI9	672 aa	Known RBP	13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	SERPINB13	Q9UIV8	391 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	TSKS	Q9UJT2	592 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	SLC4A4	Q9Y6R1	1079 aa		13.79	□□□□□ -0.2
CAPN11-204	ENST00000532171	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	TRPA1	O75762	1119 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	POLR3D	P05423	398 aa	Predicted RBP	13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	CAP2	P40123	477 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	PLCD1	P51178	756 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	LBX1	P52954	281 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	SNAPC2	Q13487	334 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	RRP1B	Q14684	758 aa	Known RBP	13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	ZMYM1	Q5SVZ6	1142 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	IFNL1	Q8IU54	200 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	BRI3BP	Q8WY22	251 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	DDRGK1	Q96HY6	314 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	KCNH4	Q9UQ05	1017 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	PHIP	Q8WWQ0	1821 aa		13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.78	□□□□□ -0.2
CAPN11-204	ENST00000532171	CCL15-CCL14	A0A0B4J2E2	113 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	TRIM6-TRIM34	B2RNG4	842 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	ALDH1A1	P00352	501 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	NEFL	P07196	543 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	EVX2	Q03828	476 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	CCL15	Q16663	113 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	TICAM2	Q86XR7	235 aa		13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	SEC62	Q99442	399 aa	Known RBP	13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.77	□□□□□ -0.21
CAPN11-204	ENST00000532171	GDF11	O95390	407 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	CYP2D6	P10635	497 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	CETP	P11597	493 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	GNAT2	P19087	354 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	GABPA	Q06546	454 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	TATDN1	Q6P1N9	297 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	GIMAP6	Q6P9H5	292 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	CCDC84	Q86UT8	332 aa	Predicted RBP	13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	AMOTL1	Q8IY63	956 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	RILPL2	Q969X0	211 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	PTPN18	Q99952	460 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	CFHR5	Q9BXR6	569 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	PRDM10	Q9NQV6	1147 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	ARPP21	Q9UBL0	812 aa	Predicted RBP	13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	ZHX2	Q9Y6X8	837 aa		13.76	□□□□□ -0.21
CAPN11-204	ENST00000532171	PTPRF	P10586	1907 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	GSG1L2	A8MUP6	293 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	USP17L12	C9JPN9	530 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	USP17L21	D6R901	530 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	CXCL11	O14625	94 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	ASNS	P08243	561 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	SHMT1	P34896	483 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	JAG1	P78504	1218 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	C12orf60	Q5U649	245 aa		13.75	□□□□□ -0.21
CAPN11-204	ENST00000532171	OTUD7B	Q6GQQ9	843 aa		13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms