RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 GSTT1P30711 240 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 PEX19P40855 299 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 MAPK9P45984 424 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 STT3AP46977 705 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 MAP3K11Q16584 847 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 SEZ6Q53EL9 994 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 GPR158Q5T848 1215 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 KIAA0319Q5VV43 1072 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 TTC16Q8NEE8 873 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 GPR152Q8TDT2 470 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 CLIP3Q96DZ5 547 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 CCDC34Q96HJ3 373 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 CLUHP3Q96NS8 147 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 FERD3LQ96RJ6 166 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 SPATA9Q9BWV2 254 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 NPHS2Q9NP85 383 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 SMYD2Q9NRG4 433 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 FBXO10Q9UK96 956 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 ZBTB21Q9ULJ3 1066 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 AFG3L2Q9Y4W6 797 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 GOLGA6L6A8MZA4 724 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 BAIAP3O94812 1187 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 FBXO21O94952 628 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 STAU1O95793 577 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 PF4P02776 101 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 APBA1Q02410 837 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 TUBB8Q3ZCM7 444 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 ARHGAP29Q52LW3 1261 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 SNAP47Q5SQN1 464 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 MRM1Q6IN84 353 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 ZBTB38Q8NAP3 1195 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 NAXEQ8NCW5 288 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 LSM14AQ8ND56 463 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 COG1Q8WTW3 980 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 KIFC2Q96AC6 838 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 PPM1MQ96MI6 270 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 FOXD3Q9UJU5 478 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 TLR6Q9Y2C9 796 aa6.23□□□□□ -1.41
ECHDC1-222ENST00000531967 RLBP1P12271 317 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 JUNDP17535 347 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 CCNFP41002 786 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 GDF10P55107 478 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 ATP13A4Q4VNC1 1196 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 FNDC3BQ53EP0 1204 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 ZC3H12BQ5HYM0 836 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 KIAA1614Q5VZ46 1190 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 CYB5RLQ6IPT4 315 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 C6orf15Q6UXA7 325 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 EPM2AIP1Q7L775 607 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 ZNF652Q9Y2D9 606 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 A0A087WZG4 1122 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 FAM83GA6ND36 823 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 PLD2O14939 933 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 CAPN3P20807 821 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 PSMA3P25788 255 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 UBA7P41226 1012 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 AK2P54819 239 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 ADCY1Q08828 1119 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 TRIM14Q14142 442 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 PTPN21Q16825 1174 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 BLOC1S3Q6QNY0 202 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 LCA5Q86VQ0 697 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 YTHDC1Q96MU7 727 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 ESF1Q9H501 851 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 SMC4Q9NTJ3 1288 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 SERTAD1Q9UHV2 236 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 CEP131Q9UPN4 1083 aa6.22□□□□□ -1.41
ECHDC1-222ENST00000531967 GTPBP10A4D1E9 387 aaKnown RBP6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 BRINP1O60477 761 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 TMCC2O75069 709 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 SDSP20132 328 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 ROR1Q01973 937 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 MTA1Q13330 715 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 KIF22Q14807 665 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 BRICD5Q6PL45 260 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 NYAP1Q6ZVC0 841 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 PPM1KQ8N3J5 372 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 MYD88Q99836 296 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 DHRS4Q9BTZ2 278 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 ALG13Q9NP73 1137 aaKnown RBP6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 ANLNQ9NQW6 1124 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 BLOC1S4Q9NUP1 217 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 INTS7Q9NVH2 962 aaKnown RBP6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 EVA1BQ9NVM1 165 aa6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 PNMA8BQ9ULN7 279 aaPredicted RBP6.21□□□□□ -1.41
ECHDC1-222ENST00000531967 ERC2O15083 957 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 MBD4O95243 580 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 CCNYL3P0C7X3 344 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 PF4V1P10720 104 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 ZNF131P52739 623 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 TMPRSS15P98073 1019 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 FOXK2Q01167 660 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 PRKG2Q13237 762 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 DNAJC21Q5F1R6 531 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 AGAP9Q5VTM2 703 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 SLC9A9Q8IVB4 645 aa6.21□□□□□ -1.42
ECHDC1-222ENST00000531967 FAM178BQ8IXR5 827 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms