RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 VDRP11473 427 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 HOXB4P17483 251 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 PIP4K2BP78356 416 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 NEXNQ0ZGT2 675 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 TRIM28Q13263 835 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 BIRC2Q13490 618 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 AMOTQ4VCS5 1084 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 SUGP1Q8IWZ8 645 aaKnown RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 MYRIPQ8NFW9 859 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 SYAP1Q96A49 352 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 CFAP53Q96M91 514 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 AGAP3Q96P47 875 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 CLEC4MQ9H2X3 399 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 SOX17Q9H6I2 414 aaPredicted RBP5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 OSGEPQ9NPF4 335 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 SOX13Q9UN79 622 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 RPGRIP1LQ68CZ1 1315 aa5.71□□□□□ -1.5
ECHDC1-221ENST00000531582 DHX29Q7Z478 1369 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CT47B1P0C2W7 299 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 ACPPP15309 386 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 IRS1P35568 1242 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 RHBDL3P58872 404 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CBX1P83916 185 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 HNRNPUQ00839 825 aaKnown RBP eCLIP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 TRAF1Q13077 416 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CHAF1AQ13111 956 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 TMED1Q13445 227 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 SYCP1Q15431 976 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 MUM1L1Q5H9M0 696 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 NXPE4Q6UWF7 544 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CLEC4GQ6UXB4 293 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 GLIS3Q8NEA6 775 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 ATL2Q8NHH9 583 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 NOL10Q9BSC4 688 aaKnown RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 POLR3CQ9BUI4 534 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 LACRTQ9GZZ8 138 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 GRPEL1Q9HAV7 217 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 ABCB6Q9NP58 842 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CCDC144AA2RUR9 1427 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 BICRAQ9NZM4 1560 aa5.7□□□□□ -1.5
ECHDC1-221ENST00000531582 CBFA2T2O43439 604 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 PPFIA4O75335 1185 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 TRPA1O75762 1119 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 VAMP1P23763 118 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 BAG6P46379 1132 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 NAP1L1P55209 391 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 FCGRTP55899 365 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 SNRPNP63162 240 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 COL9A3Q14050 684 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 IKBKEQ14164 716 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 SF3A1Q15459 793 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 PDCD2Q16342 344 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 ZFYVE27Q5T4F4 411 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 C8orf86Q6ZUL3 223 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 ILDR2Q71H61 639 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 ANKRD13BQ86YJ7 626 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 DMRTC2Q8IXT2 367 aaPredicted RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 SMC5Q8IY18 1101 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 SAMD3Q8N6K7 520 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 ACRBPQ8NEB7 543 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 NACC1Q96RE7 527 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 CEP89Q96ST8 783 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 CEP44Q9C0F1 390 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 MAF1Q9H063 256 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 SEC31BQ9NQW1 1179 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 UTP6Q9NYH9 597 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 RSPH14Q9UHP6 348 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 NOL7Q9UMY1 257 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 R3HCC1Q9Y3T6 440 aaKnown RBP5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 RNF123Q5XPI4 1314 aa5.69□□□□□ -1.5
ECHDC1-221ENST00000531582 UNCXA6NJT0 531 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 PES1O00541 588 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 SMARCA5O60264 1052 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 SLFN14P0C7P3 912 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 SPATA31C1P0DKV0 1188 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 GRIA4P48058 902 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 CCT2P78371 535 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 PPP2R3AQ06190 1150 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 RABEP1Q15276 862 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 HP1BP3Q5SSJ5 553 aaPredicted RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 PI16Q6UXB8 463 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 FBXO11Q86XK2 927 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 TRIM11Q96F44 468 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 RMDN2Q96LZ7 410 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 HHIPQ96QV1 700 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 SETDB2Q96T68 719 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 LZTS2Q9BRK4 669 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 OSBPL7Q9BZF2 842 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 IQCGQ9H095 443 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 ZNF576Q9H609 170 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 METTL14Q9HCE5 456 aaKnown RBP5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 ETAA1Q9NY74 926 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 VTI1BQ9UEU0 232 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 SAMM50Q9Y512 469 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 CNTNAP5Q8WYK1 1306 aa5.68□□□□□ -1.5
ECHDC1-221ENST00000531582 A0A0A0MRY4 1105 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms