RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 MAGEA10P43363 369 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-206ENST00000531430 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
NEDD8-206ENST00000531430 MAP3K10Q02779 954 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 TFCP2Q12800 502 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 XAGE2Q96GT9 111 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 GDF15Q99988 308 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 FBXO3Q9UK99 471 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 NOB1Q9ULX3 412 aaKnown RBP11.43□□□□□ -0.58
NEDD8-206ENST00000531430 HDAC5Q9UQL6 1122 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 MYH2Q9UKX2 1941 aa11.43□□□□□ -0.58
NEDD8-206ENST00000531430 MROH7-TTC4A0A0A0MT08 1334 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 GAKO14976 1311 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 GPR75-ASB3A0A0A6YYF3 556 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 A0A1B0GUL7 405 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 TBC1D12O60347 775 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 BMP8BP34820 402 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 GSTO1P78417 241 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 TEX11Q8IYF3 940 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 ANKLE1Q8NAG6 615 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 PROCA1Q8NCQ7 364 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-206ENST00000531430 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-206ENST00000531430 P2RX7Q99572 595 aaKnown RBP11.42□□□□□ -0.58
NEDD8-206ENST00000531430 NOL10Q9BSC4 688 aaKnown RBP11.42□□□□□ -0.58
NEDD8-206ENST00000531430 TRIM34Q9BYJ4 488 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 OSBPL5Q9H0X9 879 aaPredicted RBP11.42□□□□□ -0.58
NEDD8-206ENST00000531430 AS3MTQ9HBK9 375 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 GJD2Q9UKL4 321 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 AKAP2Q9Y2D5 859 aa11.42□□□□□ -0.58
NEDD8-206ENST00000531430 ATRNL1Q5VV63 1379 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 E9PSI1 815 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
NEDD8-206ENST00000531430 CAP2P40123 477 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 RHBDL3P58872 404 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
NEDD8-206ENST00000531430 MVPQ14764 893 aaKnown RBP11.41□□□□□ -0.58
NEDD8-206ENST00000531430 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 PAGR1Q9BTK6 254 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 LRP2BPQ9P2M1 347 aa11.41□□□□□ -0.58
NEDD8-206ENST00000531430 SRGAP3O43295 1099 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-206ENST00000531430 MTMR2Q13614 643 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 PDE3AQ14432 1141 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 RRP1BQ14684 758 aaKnown RBP11.4□□□□□ -0.58
NEDD8-206ENST00000531430 WDR78Q5VTH9 848 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 TDHQ8IZJ6 230 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 CRACR2BQ8N4Y2 399 aaPredicted RBP11.4□□□□□ -0.58
NEDD8-206ENST00000531430 TRIB2Q92519 343 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 FAM161BQ96MY7 647 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 COPRSQ9NQ92 184 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
NEDD8-206ENST00000531430 COL6A3P12111 3177 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 ZKSCAN1P17029 563 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-206ENST00000531430 CNGA1P29973 690 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 SLFN5Q08AF3 891 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 SPATA5Q8NB90 893 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
NEDD8-206ENST00000531430 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
NEDD8-206ENST00000531430 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 API5Q9BZZ5 524 aaKnown RBP11.39□□□□□ -0.59
NEDD8-206ENST00000531430 SNRKQ9NRH2 765 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 PI4KBQ9UBF8 816 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 OGDHLQ9ULD0 1010 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 NDUFB9Q9Y6M9 179 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 DOCK2Q92608 1830 aa11.39□□□□□ -0.59
NEDD8-206ENST00000531430 GDF11O95390 407 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 BAG3O95817 575 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 CCND3P30281 292 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 BACE1P56817 501 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 CACNB2Q08289 660 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 G3BP1Q13283 466 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 Q3C1V9 767 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 LRIT3Q3SXY7 679 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 TGFBRAP1Q8WUH2 860 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 MEIS3Q99687 375 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 LBHD1Q9BQE6 289 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 SENP6Q9GZR1 1112 aaPredicted RBP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 MTMR10Q9NXD2 777 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 AATFQ9NY61 560 aaKnown RBP eCLIP11.38□□□□□ -0.59
NEDD8-206ENST00000531430 STXBP5LQ9Y2K9 1186 aa11.38□□□□□ -0.59
NEDD8-206ENST00000531430 USP17L10C9JJH3 530 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-206ENST00000531430 HERVK_113P62684 666 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 ZYXQ15942 572 aaKnown RBP11.37□□□□□ -0.59
NEDD8-206ENST00000531430 CCL14Q16627 93 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 SH3D19Q5HYK7 790 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
NEDD8-206ENST00000531430 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 PLEKHH3Q7Z736 793 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 ZNF384Q8TF68 577 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 RBPJLQ9UBG7 517 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 MORF4L1Q9UBU8 362 aa11.37□□□□□ -0.59
NEDD8-206ENST00000531430 SAP30BPQ9UHR5 308 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms