RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TRIM75PA6NK02 468 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 IGSF3O75054 1194 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 FMNL1O95466 1100 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-205ENST00000531042 BAG3O95817 575 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 HOXD10P28358 340 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 ZAP70P43403 619 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 PPP4CP60510 307 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 CCDC84Q86UT8 332 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-205ENST00000531042 PANK1Q8TE04 598 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 EAF2Q96CJ1 260 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-205ENST00000531042 CCDC8Q9H0W5 538 aaPredicted RBP19.34■□□□□ 0.69
CPSF1-205ENST00000531042 TLR7Q9NYK1 1049 aaKnown RBP19.34■□□□□ 0.69
CPSF1-205ENST00000531042 CDK5RAP2Q96SN8 1893 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
CPSF1-205ENST00000531042 MGAMO43451 1857 aa19.33■□□□□ 0.69
CPSF1-205ENST00000531042 PLCG2P16885 1265 aa19.33■□□□□ 0.68
CPSF1-205ENST00000531042 OSBPP22059 807 aa19.33■□□□□ 0.68
CPSF1-205ENST00000531042 SLC4A8Q2Y0W8 1093 aa19.33■□□□□ 0.68
CPSF1-205ENST00000531042 ADGRA1Q86SQ6 560 aa19.33■□□□□ 0.68
CPSF1-205ENST00000531042 HERC5Q9UII4 1024 aaKnown RBP19.33■□□□□ 0.68
CPSF1-205ENST00000531042 FOCADQ5VW36 1801 aa19.32■□□□□ 0.68
CPSF1-205ENST00000531042 MYCP01106 439 aaPredicted RBP19.32■□□□□ 0.68
CPSF1-205ENST00000531042 CAP2P40123 477 aa19.32■□□□□ 0.68
CPSF1-205ENST00000531042 RRP1BQ14684 758 aaKnown RBP19.32■□□□□ 0.68
CPSF1-205ENST00000531042 DHX36Q9H2U1 1008 aaKnown RBP19.32■□□□□ 0.68
CPSF1-205ENST00000531042 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
CPSF1-205ENST00000531042 PI4KBQ9UBF8 816 aa19.32■□□□□ 0.68
CPSF1-205ENST00000531042 SIPA1L1O43166 1804 aa19.32■□□□□ 0.68
CPSF1-205ENST00000531042 TGFBRAP1Q8WUH2 860 aa19.31■□□□□ 0.68
CPSF1-205ENST00000531042 AGTPBP1Q9UPW5 1226 aa19.31■□□□□ 0.68
CPSF1-205ENST00000531042 MYPNQ86TC9 1320 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 FCGRTP55899 365 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 SPP2Q13103 211 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 MAPKAPK5Q8IW41 473 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 ZNF280CQ8ND82 737 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 RAET1EQ8TD07 263 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 TBC1D2Q9BYX2 928 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 EXOC6BQ9Y2D4 811 aa19.3■□□□□ 0.68
CPSF1-205ENST00000531042 LOC285556D6RIA3 1793 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 FLT1P17948 1338 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 USP17L5A8MUK1 530 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 GRK4P32298 578 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 TREML2Q5T2D2 321 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
CPSF1-205ENST00000531042 PROCA1Q8NCQ7 364 aaPredicted RBP19.29■□□□□ 0.68
CPSF1-205ENST00000531042 MS4A1P11836 297 aa19.28■□□□□ 0.68
CPSF1-205ENST00000531042 CYP7A1P22680 504 aa19.28■□□□□ 0.68
CPSF1-205ENST00000531042 PRKCZQ05513 592 aa19.28■□□□□ 0.68
CPSF1-205ENST00000531042 MTFR1Q15390 333 aa19.28■□□□□ 0.68
CPSF1-205ENST00000531042 METTL16Q86W50 562 aaKnown RBP19.28■□□□□ 0.68
CPSF1-205ENST00000531042 SMCR8Q8TEV9 937 aaPredicted RBP19.28■□□□□ 0.68
CPSF1-205ENST00000531042 IDH1O75874 414 aaKnown RBP19.27■□□□□ 0.68
CPSF1-205ENST00000531042 DYNLL1P63167 89 aaKnown RBP19.27■□□□□ 0.68
CPSF1-205ENST00000531042 AACSQ86V21 672 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 FOXP4Q8IVH2 680 aaPredicted RBP19.27■□□□□ 0.68
CPSF1-205ENST00000531042 DNAJC18Q9H819 358 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 PNMA3Q9UL41 463 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 PALD1Q9ULE6 856 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 GABRQQ9UN88 632 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 NDUFB9Q9Y6M9 179 aa19.27■□□□□ 0.68
CPSF1-205ENST00000531042 HMGCS2P54868 508 aa19.26■□□□□ 0.67
CPSF1-205ENST00000531042 HSP90AB4PQ58FF6 505 aa19.26■□□□□ 0.67
CPSF1-205ENST00000531042 SH3D19Q5HYK7 790 aa19.26■□□□□ 0.67
CPSF1-205ENST00000531042 ANTXR1Q9H6X2 564 aa19.26■□□□□ 0.67
CPSF1-205ENST00000531042 AS3MTQ9HBK9 375 aa19.26■□□□□ 0.67
CPSF1-205ENST00000531042 ASNSP08243 561 aa19.25■□□□□ 0.67
CPSF1-205ENST00000531042 CRACR2BQ8N4Y2 399 aaPredicted RBP19.25■□□□□ 0.67
CPSF1-205ENST00000531042 ANKRD13CQ8N6S4 541 aa19.25■□□□□ 0.67
CPSF1-205ENST00000531042 MAGEB6Q8N7X4 407 aa19.25■□□□□ 0.67
CPSF1-205ENST00000531042 RHPN1Q8TCX5 695 aa19.25■□□□□ 0.67
CPSF1-205ENST00000531042 WDR18Q9BV38 432 aa19.25■□□□□ 0.67
CPSF1-205ENST00000531042 SAP30BPQ9UHR5 308 aaKnown RBP19.25■□□□□ 0.67
CPSF1-205ENST00000531042 MYH1P12882 1939 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 TNPO2O14787 897 aaKnown RBP19.24■□□□□ 0.67
CPSF1-205ENST00000531042 JAG1P78504 1218 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 PABPC4Q13310 644 aaKnown RBP eCLIP19.24■□□□□ 0.67
CPSF1-205ENST00000531042 FAM110CQ1W6H9 321 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 TMED8Q6PL24 325 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-205ENST00000531042 CERS3Q8IU89 383 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 RPAP2Q8IXW5 612 aaPredicted RBP19.24■□□□□ 0.67
CPSF1-205ENST00000531042 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 SLAIN1Q8ND83 568 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 TRIM34Q9BYJ4 488 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 IL1RAPL2Q9NP60 686 aa19.24■□□□□ 0.67
CPSF1-205ENST00000531042 HLA-DOAP06340 250 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 CCL5P13501 91 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 FLT3LGP49771 235 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 BACE1P56817 501 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 UBXN2AP68543 259 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 MAP3K12Q12852 859 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 GCC1Q96CN9 775 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 BIN2Q9UBW5 565 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-205ENST00000531042 DDX19BQ9UMR2 479 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
CPSF1-205ENST00000531042 ADCY3O60266 1144 aa19.22■□□□□ 0.67
CPSF1-205ENST00000531042 GCLCP48506 637 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-205ENST00000531042 IRF5Q13568 498 aa19.22■□□□□ 0.67
CPSF1-205ENST00000531042 MTMR2Q13614 643 aa19.22■□□□□ 0.67
CPSF1-205ENST00000531042 SHROOM1Q2M3G4 852 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms