RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 ATRIPQ8WXE1 791 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TIGD1Q96MW7 591 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 NAPGQ99747 312 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 MLH3Q9UHC1 1453 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 H0YIN7 160 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 CHL1O00533 1208 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 STX10O60499 249 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 EIF6P56537 245 aaKnown RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 SNX16P57768 344 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TIMM10P62072 90 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 TRERF1Q96PN7 1200 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 ANAPC4Q9UJX5 808 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 KIAA0232Q92628 1395 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC117Q8IWD4 279 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 PPP1R9BQ96SB3 815 aa9.48□□□□□ -0.89
CTNND1-227ENST00000530748 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-227ENST00000530748 SMIM23A6NLE4 172 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 SLC8A3P57103 927 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 TRPC3Q13507 836 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 NONOQ15233 471 aaKnown RBP eCLIP9.47□□□□□ -0.89
CTNND1-227ENST00000530748 SAMD9Q5K651 1589 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 UBL4BQ8N7F7 174 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ARHGEF35A5YM69 484 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 TXKP42681 527 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 KCNK9Q9NPC2 374 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ARPP21Q9UBL0 812 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-227ENST00000530748 CLUL1Q15846 466 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 CALCRLQ16602 461 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 KBTBD3Q8NAB2 608 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ZFP91Q96JP5 570 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-227ENST00000530748 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 SAMD15Q9P1V8 674 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 TAF5LO75529 589 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 KRT9P35527 623 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 CCDC25Q86WR0 208 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 FAM76AQ8TAV0 307 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 SEC62Q99442 399 aaKnown RBP9.47□□□□□ -0.89
CTNND1-227ENST00000530748 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 UTP11Q9Y3A2 253 aaKnown RBP9.47□□□□□ -0.89
CTNND1-227ENST00000530748 SGSM2O43147 1006 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 FAM135BQ49AJ0 1406 aa9.47□□□□□ -0.89
CTNND1-227ENST00000530748 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 MYCLP12524 364 aaPredicted RBP9.46□□□□□ -0.89
CTNND1-227ENST00000530748 ZBTB16Q05516 673 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 FCHSD1Q86WN1 690 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 SERPINA10Q9UK55 444 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 CEP170Q5SW79 1584 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 POLR2DO15514 142 aaKnown RBP9.46□□□□□ -0.89
CTNND1-227ENST00000530748 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.89
CTNND1-227ENST00000530748 TBC1D8BQ0IIM8 1120 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 VPS16Q9H269 839 aa9.46□□□□□ -0.89
CTNND1-227ENST00000530748 SPOPO43791 374 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SEC24BO95487 1268 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 CSGALNACT2Q8N6G5 542 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 MLKLQ8NB16 471 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 KLHDC4Q8TBB5 520 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 OTUD7AQ8TE49 926 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SYNMO15061 1565 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SHROOM2Q13796 1616 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 STK10O94804 968 aaKnown RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 ERCC5P28715 1186 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 ALDH1B1P30837 517 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 CTSWP56202 376 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 FANCCQ00597 558 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SETDB1Q15047 1291 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 CABP7Q86V35 215 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SSH2Q76I76 1423 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 E7EVH7 732 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 BRDTQ58F21 947 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SNX29Q8TEQ0 813 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 SECISBP2LQ93073 1101 aaKnown RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 NOX5Q96PH1 765 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 TRIM7Q9C029 511 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 DNM3Q9UQ16 869 aa9.46□□□□□ -0.9
CTNND1-227ENST00000530748 V9GYY5 206 aaPredicted RBP9.46□□□□□ -0.9
CTNND1-227ENST00000530748 NOP56O00567 594 aaKnown RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 ZAP70P43403 619 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 EIF4A1P60842 406 aaKnown RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 PPARAQ07869 468 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 POSTNQ15063 836 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 DIS3L2Q8IYB7 885 aaKnown RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 LEO1Q8WVC0 666 aaPredicted RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 NELFBQ8WX92 580 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 FAM204AQ9H8W3 233 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 KDM3AQ9Y4C1 1321 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
CTNND1-227ENST00000530748 CAPN2P17655 700 aa9.45□□□□□ -0.9
CTNND1-227ENST00000530748 PDE6BP35913 854 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms