RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
SMPD1-204ENST00000530395 DBNLQ9UJU6 430 aaKnown RBP25.58■■□□□ 1.69
SMPD1-204ENST00000530395 FAM196BA6NMK8 535 aa25.57■■□□□ 1.68
SMPD1-204ENST00000530395 SLC4A8Q2Y0W8 1093 aa25.57■■□□□ 1.68
SMPD1-204ENST00000530395 ERC1Q8IUD2 1116 aa25.57■■□□□ 1.68
SMPD1-204ENST00000530395 TRIM47Q96LD4 638 aa25.57■■□□□ 1.68
SMPD1-204ENST00000530395 DHX36Q9H2U1 1008 aaKnown RBP25.57■■□□□ 1.68
SMPD1-204ENST00000530395 SRRDQ9UH36 339 aa25.57■■□□□ 1.68
SMPD1-204ENST00000530395 HERC5Q9UII4 1024 aaKnown RBP25.57■■□□□ 1.68
SMPD1-204ENST00000530395 BCRP11274 1271 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 EN2P19622 333 aaPredicted RBP25.56■■□□□ 1.68
SMPD1-204ENST00000530395 ZAP70P43403 619 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 PPP4CP60510 307 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 PANK1Q8TE04 598 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 SH3TC2Q8TF17 1288 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 TBC1D2Q9BYX2 928 aa25.56■■□□□ 1.68
SMPD1-204ENST00000530395 CCDC8Q9H0W5 538 aaPredicted RBP25.56■■□□□ 1.68
SMPD1-204ENST00000530395 LOC285556D6RIA3 1793 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 SLC34A2O95436 690 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 OSBPP22059 807 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 FCGRTP55899 365 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 RAET1EQ8TD07 263 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 EAF2Q96CJ1 260 aaPredicted RBP25.55■■□□□ 1.68
SMPD1-204ENST00000530395 TLR7Q9NYK1 1049 aaKnown RBP25.55■■□□□ 1.68
SMPD1-204ENST00000530395 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.55■■□□□ 1.68
SMPD1-204ENST00000530395 PI4KBQ9UBF8 816 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 SIPA1L1O43166 1804 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 MYPNQ86TC9 1320 aa25.55■■□□□ 1.68
SMPD1-204ENST00000530395 CTGFP29279 349 aa25.54■■□□□ 1.68
SMPD1-204ENST00000530395 CCDC84Q86UT8 332 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-204ENST00000530395 SMCR8Q8TEV9 937 aaPredicted RBP25.54■■□□□ 1.68
SMPD1-204ENST00000530395 AGTPBP1Q9UPW5 1226 aa25.54■■□□□ 1.68
SMPD1-204ENST00000530395 MYCP01106 439 aaPredicted RBP25.53■■□□□ 1.68
SMPD1-204ENST00000530395 TGFBRAP1Q8WUH2 860 aa25.53■■□□□ 1.68
SMPD1-204ENST00000530395 PIH1D3Q9NQM4 214 aaKnown RBP25.53■■□□□ 1.68
SMPD1-204ENST00000530395 PNMA3Q9UL41 463 aa25.53■■□□□ 1.68
SMPD1-204ENST00000530395 EXOC6BQ9Y2D4 811 aa25.53■■□□□ 1.68
SMPD1-204ENST00000530395 CAP2P40123 477 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 HSP90AB4PQ58FF6 505 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 ADGRA1Q86SQ6 560 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 MAPKAPK5Q8IW41 473 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 PROCA1Q8NCQ7 364 aaPredicted RBP25.52■■□□□ 1.68
SMPD1-204ENST00000530395 ZNF280CQ8ND82 737 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 TRIM34Q9BYJ4 488 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 FLT1P17948 1338 aa25.52■■□□□ 1.68
SMPD1-204ENST00000530395 SPP2Q13103 211 aa25.51■■□□□ 1.67
SMPD1-204ENST00000530395 AS3MTQ9HBK9 375 aa25.51■■□□□ 1.67
SMPD1-204ENST00000530395 USP17L5A8MUK1 530 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 IDH1O75874 414 aaKnown RBP25.5■■□□□ 1.67
SMPD1-204ENST00000530395 MYH1P12882 1939 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 CYP7A1P22680 504 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 GRK4P32298 578 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 PABPC4Q13310 644 aaKnown RBP eCLIP25.5■■□□□ 1.67
SMPD1-204ENST00000530395 AACSQ86V21 672 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 CERS3Q8IU89 383 aa25.5■■□□□ 1.67
SMPD1-204ENST00000530395 CRACR2BQ8N4Y2 399 aaPredicted RBP25.5■■□□□ 1.67
SMPD1-204ENST00000530395 PRKCZQ05513 592 aa25.49■■□□□ 1.67
SMPD1-204ENST00000530395 HLA-DOAP06340 250 aa25.48■■□□□ 1.67
SMPD1-204ENST00000530395 ASNSP08243 561 aa25.48■■□□□ 1.67
SMPD1-204ENST00000530395 TREML2Q5T2D2 321 aa25.48■■□□□ 1.67
SMPD1-204ENST00000530395 TMED8Q6PL24 325 aaPredicted RBP25.48■■□□□ 1.67
SMPD1-204ENST00000530395 FOXP4Q8IVH2 680 aaPredicted RBP25.48■■□□□ 1.67
SMPD1-204ENST00000530395 DDX19BQ9UMR2 479 aa25.48■■□□□ 1.67
SMPD1-204ENST00000530395 HMGCS2P54868 508 aa25.47■■□□□ 1.67
SMPD1-204ENST00000530395 MAP3K12Q12852 859 aa25.47■■□□□ 1.67
SMPD1-204ENST00000530395 RRP1BQ14684 758 aaKnown RBP25.47■■□□□ 1.67
SMPD1-204ENST00000530395 BIN2Q9UBW5 565 aaPredicted RBP25.47■■□□□ 1.67
SMPD1-204ENST00000530395 TNPO2O14787 897 aaKnown RBP25.46■■□□□ 1.67
SMPD1-204ENST00000530395 HMMRO75330 724 aa25.46■■□□□ 1.67
SMPD1-204ENST00000530395 DYNLL1P63167 89 aaKnown RBP25.46■■□□□ 1.67
SMPD1-204ENST00000530395 METTL16Q86W50 562 aaKnown RBP25.46■■□□□ 1.67
SMPD1-204ENST00000530395 RPAP2Q8IXW5 612 aaPredicted RBP25.46■■□□□ 1.67
SMPD1-204ENST00000530395 MAGEB6Q8N7X4 407 aa25.46■■□□□ 1.67
SMPD1-204ENST00000530395 SLAIN1Q8ND83 568 aa25.46■■□□□ 1.67
SMPD1-204ENST00000530395 GINM1Q9NU53 330 aa25.46■■□□□ 1.67
SMPD1-204ENST00000530395 PALD1Q9ULE6 856 aa25.46■■□□□ 1.67
SMPD1-204ENST00000530395 UBXN2AP68543 259 aa25.45■■□□□ 1.66
SMPD1-204ENST00000530395 MIGA1Q8NAN2 632 aa25.45■■□□□ 1.66
SMPD1-204ENST00000530395 RHPN1Q8TCX5 695 aa25.45■■□□□ 1.66
SMPD1-204ENST00000530395 GCC1Q96CN9 775 aa25.45■■□□□ 1.66
SMPD1-204ENST00000530395 CHMP4BQ9H444 224 aaKnown RBP25.45■■□□□ 1.66
SMPD1-204ENST00000530395 IL1RAPL2Q9NP60 686 aa25.45■■□□□ 1.66
SMPD1-204ENST00000530395 SAP30BPQ9UHR5 308 aaKnown RBP25.45■■□□□ 1.66
SMPD1-204ENST00000530395 USP5P45974 858 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 GCLCP48506 637 aaPredicted RBP25.44■■□□□ 1.66
SMPD1-204ENST00000530395 MTFR1Q15390 333 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 FAM110CQ1W6H9 321 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 SH3D19Q5HYK7 790 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 CLASRPQ8N2M8 674 aaKnown RBP25.44■■□□□ 1.66
SMPD1-204ENST00000530395 ANKRD13CQ8N6S4 541 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 WDR18Q9BV38 432 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 DNAJC18Q9H819 358 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 NDUFB9Q9Y6M9 179 aa25.44■■□□□ 1.66
SMPD1-204ENST00000530395 TTF1Q15361 905 aaPredicted RBP25.43■■□□□ 1.66
SMPD1-204ENST00000530395 NKX2-3Q8TAU0 364 aa25.43■■□□□ 1.66
SMPD1-204ENST00000530395 KIF1BPQ96EK5 621 aa25.43■■□□□ 1.66
SMPD1-204ENST00000530395 TMOD4Q9NZQ9 345 aa25.43■■□□□ 1.66
SMPD1-204ENST00000530395 GABRQQ9UN88 632 aa25.43■■□□□ 1.66
SMPD1-204ENST00000530395 COG6Q9Y2V7 657 aa25.43■■□□□ 1.66
SMPD1-204ENST00000530395 MTMR2Q13614 643 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms