RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 GJD2Q9UKL4 321 aa12.96□□□□□ -0.33
COPB1-207ENST00000529866 PFASO15067 1338 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 ZBTB22O15209 634 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 XRCC5P13010 732 aaKnown RBP12.95□□□□□ -0.34
COPB1-207ENST00000529866 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
COPB1-207ENST00000529866 CYP2B6P20813 491 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 PHKA1P46020 1223 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
COPB1-207ENST00000529866 TRIM32Q13049 653 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 MAP3K21Q5TCX8 1036 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 FAM109BQ6ICB4 259 aaPredicted RBP12.95□□□□□ -0.34
COPB1-207ENST00000529866 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 NUDT12Q9BQG2 462 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 USP44Q9H0E7 712 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 SIL1Q9H173 461 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 AS3MTQ9HBK9 375 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 DDX4Q9NQI0 724 aaKnown RBP12.95□□□□□ -0.34
COPB1-207ENST00000529866 MORF4L1Q9UBU8 362 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 ABCF2Q9UG63 623 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 MGAMO43451 1857 aa12.95□□□□□ -0.34
COPB1-207ENST00000529866 MROH7-TTC4A0A0A0MT08 1334 aa12.94□□□□□ -0.34
COPB1-207ENST00000529866 PDS5AQ29RF7 1337 aaKnown RBP12.94□□□□□ -0.34
COPB1-207ENST00000529866 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
COPB1-207ENST00000529866 NPM3O75607 178 aaKnown RBP12.94□□□□□ -0.34
COPB1-207ENST00000529866 IL15P40933 162 aaPredicted RBP12.94□□□□□ -0.34
COPB1-207ENST00000529866 CCDC102BQ68D86 513 aa12.94□□□□□ -0.34
COPB1-207ENST00000529866 CCAR1Q8IX12 1150 aaKnown RBP12.94□□□□□ -0.34
COPB1-207ENST00000529866 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
COPB1-207ENST00000529866 LBHD1Q9BQE6 289 aaPredicted RBP12.94□□□□□ -0.34
COPB1-207ENST00000529866 USP17L5A8MUK1 530 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 MAP4K4O95819 1239 aaPredicted RBP12.93□□□□□ -0.34
COPB1-207ENST00000529866 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 COL6A1P12109 1028 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 MAPK4P31152 587 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 MDM2Q00987 491 aaPredicted RBP12.93□□□□□ -0.34
COPB1-207ENST00000529866 RASGRF1Q13972 1273 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 SH3D19Q5HYK7 790 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 GTF3C2Q8WUA4 911 aaPredicted RBP12.93□□□□□ -0.34
COPB1-207ENST00000529866 TMOD4Q9NZQ9 345 aa12.93□□□□□ -0.34
COPB1-207ENST00000529866 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 ZNF521Q96K83 1311 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 GPR75-ASB3A0A0A6YYF3 556 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 FAM196BA6NMK8 535 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 UBTFL1P0CB47 393 aaPredicted RBP12.92□□□□□ -0.34
COPB1-207ENST00000529866 CAP2P40123 477 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 RGS2P41220 211 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 GSTO1P78417 241 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 ERICH6Q7L0X2 663 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 MRPL50Q8N5N7 158 aaKnown RBP12.92□□□□□ -0.34
COPB1-207ENST00000529866 GUCD1Q96NT3 240 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
COPB1-207ENST00000529866 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
COPB1-207ENST00000529866 DOCK1Q14185 1865 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 LDHCP07864 332 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 RHBDL3P58872 404 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 MTMR2Q13614 643 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 LRRC26Q2I0M4 334 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 APBA2Q99767 749 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 CWC22Q9HCG8 908 aaKnown RBP12.91□□□□□ -0.34
COPB1-207ENST00000529866 HERC5Q9UII4 1024 aaKnown RBP12.91□□□□□ -0.34
COPB1-207ENST00000529866 ALPK3Q96L96 1907 aa12.91□□□□□ -0.34
COPB1-207ENST00000529866 ASNSP08243 561 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 ADORA1P30542 326 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 HOXA7P31268 230 aaPredicted RBP12.9□□□□□ -0.34
COPB1-207ENST00000529866 HERVK_113P62684 666 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 MECOMQ03112 1051 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 CACNB2Q08289 660 aaPredicted RBP12.9□□□□□ -0.34
COPB1-207ENST00000529866 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
COPB1-207ENST00000529866 FAM161BQ96MY7 647 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 WDR18Q9BV38 432 aa12.9□□□□□ -0.34
COPB1-207ENST00000529866 DDX60LQ5H9U9 1706 aaKnown RBP12.9□□□□□ -0.34
COPB1-207ENST00000529866 BACE1P56817 501 aa12.89□□□□□ -0.35
COPB1-207ENST00000529866 LHX8Q68G74 356 aa12.89□□□□□ -0.35
COPB1-207ENST00000529866 P2RX7Q99572 595 aaKnown RBP12.89□□□□□ -0.35
COPB1-207ENST00000529866 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
COPB1-207ENST00000529866 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
COPB1-207ENST00000529866 AKAP2Q9Y2D5 859 aa12.89□□□□□ -0.35
COPB1-207ENST00000529866 PTPRFP10586 1907 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 MYH13Q9UKX3 1938 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 MSCO60682 206 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
COPB1-207ENST00000529866 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
COPB1-207ENST00000529866 ERVK-9P63128 1117 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 ERVK-24P63145 666 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 TEX11Q8IYF3 940 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
COPB1-207ENST00000529866 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 GINM1Q9NU53 330 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 DOCK3Q8IZD9 2030 aa12.88□□□□□ -0.35
COPB1-207ENST00000529866 LOC285556D6RIA3 1793 aa12.87□□□□□ -0.35
COPB1-207ENST00000529866 SPTBN5Q9NRC6 3674 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms