RNA–Protein interactions for RNA: ENST00000529851.5

APLF-206, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,863 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-206ENST00000529851 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
APLF-206ENST00000529851 LRRN4CLQ8ND94 238 aa18.06■□□□□ 0.48
APLF-206ENST00000529851 SNX14Q9Y5W7 946 aa18.06■□□□□ 0.48
APLF-206ENST00000529851 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 DRC1Q96MC2 740 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 CD209Q9NNX6 404 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 UFL1O94874 794 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 DPP8Q6V1X1 898 aaPredicted RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 VPS37DQ86XT2 251 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 TXLNBQ8N3L3 684 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 FAM200AQ8TCP9 573 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 MYCBPQ99417 103 aaPredicted RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 MTA3Q9BTC8 594 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 POLLQ9UGP5 575 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 SLU7O95391 586 aaKnown RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 LARGE1O95461 756 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 PCP11498 1178 aaKnown RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 PPP4CP60510 307 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 TMEM87AQ8NBN3 555 aa18.05■□□□□ 0.48
APLF-206ENST00000529851 INTS4Q96HW7 963 aaKnown RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 PIH1D3Q9NQM4 214 aaKnown RBP18.05■□□□□ 0.48
APLF-206ENST00000529851 PDE6AP16499 860 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 SART3Q15020 963 aaKnown RBP18.04■□□□□ 0.48
APLF-206ENST00000529851 MUM1L1Q5H9M0 696 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 MSL1Q68DK7 614 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 PIM2Q9P1W9 311 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 ECM29Q5VYK3 1845 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 COL2A1P02458 1487 aaPredicted RBP18.04■□□□□ 0.48
APLF-206ENST00000529851 SLFNL1Q499Z3 407 aa18.04■□□□□ 0.48
APLF-206ENST00000529851 MYO3BQ8WXR4 1341 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 A0A0D9SFI3 127 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 LDHCP07864 332 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 CKAP2LQ8IYA6 745 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 CLIP2Q9UDT6 1046 aa18.03■□□□□ 0.48
APLF-206ENST00000529851 CT47A1Q5JQC4 288 aaPredicted RBP18.03■□□□□ 0.48
APLF-206ENST00000529851 CHD4Q14839 1912 aa18.02■□□□□ 0.48
APLF-206ENST00000529851 AK2P54819 239 aa18.02■□□□□ 0.48
APLF-206ENST00000529851 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.48
APLF-206ENST00000529851 CNPY4Q8N129 248 aa18.02■□□□□ 0.48
APLF-206ENST00000529851 NPM3O75607 178 aaKnown RBP18.02■□□□□ 0.48
APLF-206ENST00000529851 H2AFXP16104 143 aaPredicted RBP18.02■□□□□ 0.48
APLF-206ENST00000529851 GYG1P46976 350 aa18.02■□□□□ 0.48
APLF-206ENST00000529851 CDK5RAP2Q96SN8 1893 aa18.02■□□□□ 0.48
APLF-206ENST00000529851 HMGB1P09429 215 aaKnown RBP18.01■□□□□ 0.47
APLF-206ENST00000529851 CASTP20810 708 aaKnown RBP18.01■□□□□ 0.47
APLF-206ENST00000529851 ZNF75DP51815 510 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 MRVI1Q9Y6F6 885 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 GAKO14976 1311 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 ZC3H12CQ9C0D7 883 aaKnown RBP18.01■□□□□ 0.47
APLF-206ENST00000529851 PSMA5P28066 241 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 DNM1Q05193 864 aaKnown RBP18.01■□□□□ 0.47
APLF-206ENST00000529851 ANO6Q4KMQ2 910 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 STRIP1Q5VSL9 837 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 RUFY3Q7L099 469 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 CBX8Q9HC52 389 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 SPON1Q9HCB6 807 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 JRKLQ9Y4A0 524 aa18.01■□□□□ 0.47
APLF-206ENST00000529851 ZSCAN22P10073 491 aaPredicted RBP18■□□□□ 0.47
APLF-206ENST00000529851 GUCY2CP25092 1073 aa18■□□□□ 0.47
APLF-206ENST00000529851 TYRO3Q06418 890 aa18■□□□□ 0.47
APLF-206ENST00000529851 CCDC24Q8N4L8 307 aa18■□□□□ 0.47
APLF-206ENST00000529851 NSUN4Q96CB9 384 aaKnown RBP18■□□□□ 0.47
APLF-206ENST00000529851 ANAPC4Q9UJX5 808 aa18■□□□□ 0.47
APLF-206ENST00000529851 PLCG2P16885 1265 aa18■□□□□ 0.47
APLF-206ENST00000529851 ARHGAP29Q52LW3 1261 aa18■□□□□ 0.47
APLF-206ENST00000529851 CTR9Q6PD62 1173 aa18■□□□□ 0.47
APLF-206ENST00000529851 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
APLF-206ENST00000529851 RRP15Q9Y3B9 282 aaKnown RBP18■□□□□ 0.47
APLF-206ENST00000529851 NAV1Q8NEY1 1877 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 SLC9C2Q5TAH2 1124 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 NYAP1Q6ZVC0 841 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 SRLQ86TD4 932 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 NECAB1Q8N987 351 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 BANK1Q8NDB2 785 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 MYH2Q9UKX2 1941 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 SEC31AO94979 1220 aaKnown RBP17.99■□□□□ 0.47
APLF-206ENST00000529851 DPEP1P16444 411 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
APLF-206ENST00000529851 TPM4P67936 248 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 E2F4Q16254 413 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
APLF-206ENST00000529851 JAKMIP1Q96N16 626 aaKnown RBP17.99■□□□□ 0.47
APLF-206ENST00000529851 STRBPQ96SI9 672 aaKnown RBP17.99■□□□□ 0.47
APLF-206ENST00000529851 PATL2C9JE40 543 aaKnown RBP17.98■□□□□ 0.47
APLF-206ENST00000529851 R3HDM1Q15032 1099 aaKnown RBP17.98■□□□□ 0.47
APLF-206ENST00000529851 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
APLF-206ENST00000529851 SKILP12757 684 aa17.98■□□□□ 0.47
APLF-206ENST00000529851 SYT1P21579 422 aa17.98■□□□□ 0.47
APLF-206ENST00000529851 DALRD3Q5D0E6 543 aaKnown RBP17.98■□□□□ 0.47
APLF-206ENST00000529851 PLA2G4DQ86XP0 818 aa17.98■□□□□ 0.47
APLF-206ENST00000529851 HSPD1P10809 573 aaKnown RBP17.97■□□□□ 0.47
APLF-206ENST00000529851 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
APLF-206ENST00000529851 LRRC8AQ8IWT6 810 aa17.97■□□□□ 0.47
APLF-206ENST00000529851 STX6O43752 255 aa17.97■□□□□ 0.47
APLF-206ENST00000529851 PACS2Q86VP3 889 aa17.97■□□□□ 0.47
APLF-206ENST00000529851 CCDC83Q8IWF9 413 aa17.97■□□□□ 0.47
APLF-206ENST00000529851 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
APLF-206ENST00000529851 ZSWIM6Q9HCJ5 1215 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms