RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
PPP1CA-206ENST00000529724 TRIM43Q96BQ3 446 aaPredicted RBP13.32□□□□□ -0.28
PPP1CA-206ENST00000529724 DNM1LO00429 736 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 SNX17Q15036 470 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 TMEM31Q5JXX7 168 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 TSPYL6Q8N831 410 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 IFT57Q9NWB7 429 aa13.31□□□□□ -0.28
PPP1CA-206ENST00000529724 ITGB8P26012 769 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 DIXDC1Q155Q3 683 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 CCDC57Q2TAC2 916 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 TRIM60Q495X7 471 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 SLC39A5Q6ZMH5 540 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 VPS37DQ86XT2 251 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 LPAR1Q92633 364 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 TIFAQ96CG3 184 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 GAS2L1Q99501 681 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 TXNRD2Q9NNW7 524 aa13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 DDX20Q9UHI6 824 aaKnown RBP13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 LRRFIP2Q9Y608 721 aaKnown RBP13.3□□□□□ -0.28
PPP1CA-206ENST00000529724 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 FRAT2O75474 233 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 TAF7LQ5H9L4 462 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 MORN1Q5T089 497 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 APBA2Q99767 749 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 PRDM12Q9H4Q4 367 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 CXXC1Q9P0U4 656 aaPredicted RBP13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 REV3LO60673 3130 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 RFX7Q2KHR2 1363 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
PPP1CA-206ENST00000529724 RGS2P41220 211 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 MRE11P49959 708 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 HMGCS2P54868 508 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 SPP2Q13103 211 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 USP40Q9NVE5 1235 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 FLRT1Q9NZU1 646 aa13.28□□□□□ -0.28
PPP1CA-206ENST00000529724 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 RGS3P49796 1198 aa13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 GNAI1P63096 354 aa13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 CHMP4AQ9BY43 222 aa13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 PORCNQ9H237 461 aa13.27□□□□□ -0.29
PPP1CA-206ENST00000529724 MSCO60682 206 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 GPR37L1O60883 481 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 ENTPD3O75355 529 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 MAPK4P31152 587 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 PBX2P40425 430 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 TFF2Q03403 129 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 Q3C1V9 767 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 CAVIN4Q5BKX8 364 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 SH3D19Q5HYK7 790 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 GPR142Q7Z601 462 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 ZNF280CQ8ND82 737 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 TRPV1Q8NER1 839 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 GPRC5AQ8NFJ5 357 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 P2RX7Q99572 595 aaKnown RBP13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 IDI2Q9BXS1 227 aa13.26□□□□□ -0.29
PPP1CA-206ENST00000529724 UTYO14607 1347 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 FAM86C2PA6NEL3 165 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 KCNQ1P51787 676 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 C1orf53Q5VUE5 145 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 PLEKHH3Q7Z736 793 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 VGLL2Q8N8G2 317 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 STK31Q9BXU1 1019 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 PBX4Q9BYU1 374 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 RBPJLQ9UBG7 517 aa13.25□□□□□ -0.29
PPP1CA-206ENST00000529724 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 PRDX5P30044 214 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 HERVK_113P62684 666 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 TLE2Q04725 743 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 FLIIQ13045 1269 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 MFSD14CQ5VZR4 134 aa13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 DDX4Q9NQI0 724 aaKnown RBP13.24□□□□□ -0.29
PPP1CA-206ENST00000529724 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 IGHA2P01877 340 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 IGFBP4P22692 258 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 CNGA1P29973 690 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 HOXA7P31268 230 aaPredicted RBP13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 ERVK-9P63128 1117 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 ERVK-24P63145 666 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 IRX3P78415 501 aaPredicted RBP13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 FPGSQ05932 587 aa13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
PPP1CA-206ENST00000529724 PLXNA1Q9UIW2 1896 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms