RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 MYH7P12883 1935 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 RNF113AO15541 343 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 CTNND1O60716 968 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 MBD4O95243 580 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 USP5P45974 858 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 LBX1P52954 281 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 INHBEP58166 350 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 SREBF2Q12772 1141 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 FOXP4Q8IVH2 680 aaPredicted RBP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 OTUD5Q96G74 571 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 PTPN18Q99952 460 aa19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 CRNKL1Q9BZJ0 848 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 HERC5Q9UII4 1024 aaKnown RBP19.47■□□□□ 0.71
TSPAN4-218ENST00000529566 IRF6O14896 467 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 PRKAB2O43741 272 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 TRPA1O75762 1119 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 PPATQ06203 517 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 PPIL2Q13356 520 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 SCYL3Q8IZE3 742 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 OSBP2Q969R2 916 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 OSBPL3Q9H4L5 887 aa19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 DCP1AQ9NPI6 582 aaPredicted RBP19.46■□□□□ 0.71
TSPAN4-218ENST00000529566 IGF2BP3O00425 579 aaKnown RBP eCLIP19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 ZFYP08048 801 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 IFNL1Q8IU54 200 aa19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 BRI3BPQ8WY22 251 aa19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 PRDM10Q9NQV6 1147 aa19.45■□□□□ 0.7
TSPAN4-218ENST00000529566 PTPRAP18433 802 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 PLCD1P51178 756 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 GTF2A2P52657 109 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 SLC4A8Q2Y0W8 1093 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 COL13A1Q5TAT6 717 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 APPBP2Q92624 585 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 STRBPQ96SI9 672 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 KCNH4Q9UQ05 1017 aa19.44■□□□□ 0.7
TSPAN4-218ENST00000529566 MYH1P12882 1939 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 DDX60LQ5H9U9 1706 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 PDE4AP27815 886 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 CAP2P40123 477 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 JAG1P78504 1218 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 EVX2Q03828 476 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 EVI5LQ96CN4 794 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 CFHR5Q9BXR6 569 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 EHD4Q9H223 541 aa19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-218ENST00000529566 HLA-DOAP06340 250 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 SNAPC2Q13487 334 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 MOGSQ13724 837 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 ZMYM1Q5SVZ6 1142 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 TTC6Q86TZ1 520 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 FSD1Q9BTV5 496 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 R3HDMLQ9H3Y0 253 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 PICK1Q9NRD5 415 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 ATP8A2Q9NTI2 1148 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 MCM9Q9NXL9 1143 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 AFG3L2Q9Y4W6 797 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 ZHX2Q9Y6X8 837 aa19.42■□□□□ 0.7
TSPAN4-218ENST00000529566 CCL15-CCL14A0A0B4J2E2 113 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 M0R2C6 588 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 GABPAQ06546 454 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 CCL15Q16663 113 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 TATDN1Q6P1N9 297 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 SERPINB13Q9UIV8 391 aa19.41■□□□□ 0.7
TSPAN4-218ENST00000529566 CXCL11O14625 94 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 TBC1D8O95759 1140 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 ALDH1A1P00352 501 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 CYP2D6P10635 497 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 CETPP11597 493 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 SHROOM1Q2M3G4 852 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 LRRFIP1Q32MZ4 808 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 CCDC84Q86UT8 332 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 CRACR2BQ8N4Y2 399 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 SEC62Q99442 399 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 SLC4A4Q9Y6R1 1079 aa19.4■□□□□ 0.7
TSPAN4-218ENST00000529566 DOCK1Q14185 1865 aa19.39■□□□□ 0.7
TSPAN4-218ENST00000529566 GSG1L2A8MUP6 293 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 SMIM22K7EJ46 135 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 GPAA1O43292 621 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 POLR3DP05423 398 aaPredicted RBP19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 SHMT1P34896 483 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 TICAM2Q86XR7 235 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 FAM43AQ8N2R8 423 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 PHIPQ8WWQ0 1821 aa19.39■□□□□ 0.69
TSPAN4-218ENST00000529566 BTBD19C9JJ37 291 aa19.38■□□□□ 0.69
TSPAN4-218ENST00000529566 C12orf60Q5U649 245 aa19.38■□□□□ 0.69
TSPAN4-218ENST00000529566 NAV1Q8NEY1 1877 aa19.38■□□□□ 0.69
TSPAN4-218ENST00000529566 CYP2D7A0A087X1C5 515 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 A0A0G2JLL6 359 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 USP17L21D6R901 530 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 NOM1Q5C9Z4 860 aaKnown RBP19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 OTUD7BQ6GQQ9 843 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 GIMAP6Q6P9H5 292 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 CTR9Q6PD62 1173 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 PRRT2Q7Z6L0 340 aaPredicted RBP19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 TRIM34Q9BYJ4 488 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 GINM1Q9NU53 330 aa19.37■□□□□ 0.69
TSPAN4-218ENST00000529566 BAZ2AQ9UIF9 1905 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms