RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PRKRIP1Q9H875 184 aaPredicted RBP14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 PRKAG2Q9UGJ0 569 aa14.56□□□□□ -0.08
AMBRA1-207ENST00000529553 DDX60LQ5H9U9 1706 aaKnown RBP14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 ZKSCAN1P17029 563 aaPredicted RBP14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 MAPK4P31152 587 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 HOXA7P31268 230 aaPredicted RBP14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 SLC4A10Q6U841 1118 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 GPRC5AQ8NFJ5 357 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 DENND2AQ9ULE3 1009 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 GAKO14976 1311 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 FANCIQ9NVI1 1328 aa14.55□□□□□ -0.08
AMBRA1-207ENST00000529553 LAMA2P24043 3122 aaKnown RBP14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 TNFRSF10AO00220 468 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 HMGCS2P54868 508 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 PDE3AQ14432 1141 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 TJAP1Q5JTD0 557 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 SENP6Q9GZR1 1112 aaPredicted RBP14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 CACNA1FO60840 1977 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 DOCK3Q8IZD9 2030 aa14.54□□□□□ -0.08
AMBRA1-207ENST00000529553 TTC28Q96AY4 2481 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 TMEM265A0A087WTH1 108 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 USP17L5A8MUK1 530 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 EYA2O00167 538 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 MAP4K4O95819 1239 aaPredicted RBP14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 CCND3P30281 292 aaPredicted RBP14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 RGS2P41220 211 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 EXOSC9Q06265 439 aaKnown RBP14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 CCDC84Q86UT8 332 aaPredicted RBP14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 WDR63Q8IWG1 891 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 AS3MTQ9HBK9 375 aa14.53□□□□□ -0.08
AMBRA1-207ENST00000529553 MSCO60682 206 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 FOSL2P15408 326 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 CAP2P40123 477 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 IRX3P78415 501 aaPredicted RBP14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 SHHQ15465 462 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 MORN1Q5T089 497 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 MYLIPQ8WY64 445 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 P2RX7Q99572 595 aaKnown RBP14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 WDR18Q9BV38 432 aa14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 DDX4Q9NQI0 724 aaKnown RBP14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.52□□□□□ -0.09
AMBRA1-207ENST00000529553 EYSQ5T1H1 3165 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 AK9Q5TCS8 1911 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 SLURP2P0DP57 97 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 LPAR1Q92633 364 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 TTYH1Q9H313 450 aaPredicted RBP14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 RBPJLQ9UBG7 517 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
AMBRA1-207ENST00000529553 C19orf81C9J6K1 198 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 BACE1P56817 501 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 HERVK_113P62684 666 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 PICALMQ13492 652 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 SPTY2D1Q68D10 685 aaPredicted RBP14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 GPR142Q7Z601 462 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 PLEKHH3Q7Z736 793 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 CCAR1Q8IX12 1150 aaKnown RBP14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 APBA2Q99767 749 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 MUC3AQ02505 3323 aa14.5□□□□□ -0.09
AMBRA1-207ENST00000529553 PDS5AQ29RF7 1337 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 PRUNE2Q8WUY3 3088 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 GPR75-ASB3A0A0A6YYF3 556 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 DNM1LO00429 736 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 PLA2G5P39877 138 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 BTDP43251 543 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 RTP1P59025 263 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 CCL14Q16627 93 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 Q3C1V9 767 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 MFSD14CQ5VZR4 134 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 ATG9AQ7Z3C6 839 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 DZIP1Q86YF9 867 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 EDC3Q96F86 508 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 TXNRD2Q9NNW7 524 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 TMOD4Q9NZQ9 345 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 CEP126Q9P2H0 1117 aa14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 HERC5Q9UII4 1024 aaKnown RBP14.49□□□□□ -0.09
AMBRA1-207ENST00000529553 PHIPQ8WWQ0 1821 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 GLRX3O76003 335 aaKnown RBP14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 RFX5P48382 616 aaPredicted RBP14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 RHBDL3P58872 404 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 ERVK-9P63128 1117 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 ERVK-24P63145 666 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 MAP2K5Q13163 448 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 ATP2B3Q16720 1220 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 C9orf50Q5SZB4 431 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 FAM122AQ96E09 287 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 GINM1Q9NU53 330 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 DDX20Q9UHI6 824 aaKnown RBP14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 PTPRFP10586 1907 aa14.48□□□□□ -0.09
AMBRA1-207ENST00000529553 CIAO1O76071 339 aa14.47□□□□□ -0.09
AMBRA1-207ENST00000529553 ATN1P54259 1190 aaPredicted RBP14.47□□□□□ -0.09
AMBRA1-207ENST00000529553 SLC39A5Q6ZMH5 540 aa14.47□□□□□ -0.09
AMBRA1-207ENST00000529553 ARRDC4Q8NCT1 418 aa14.47□□□□□ -0.09
AMBRA1-207ENST00000529553 DOCK1Q14185 1865 aa14.46□□□□□ -0.09
AMBRA1-207ENST00000529553 MROH7-TTC4A0A0A0MT08 1334 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms