RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 PDGFRBP09619 1106 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC175P0C221 793 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC159P0C7I6 412 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 SPINK2P20155 84 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 NOS2P35228 1153 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 GNALP38405 381 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 INHBEP58166 350 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 FAM160A1Q05DH4 1040 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 RBL2Q08999 1139 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 RAD51AP2Q09MP3 1159 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 USP17L24Q0WX57 530 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 PTK7Q13308 1070 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ELOAQ14241 798 aaKnown RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 RASA3Q14644 834 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 TEAD4Q15561 434 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 VPS72Q15906 364 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ENOX2Q16206 610 aaKnown RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CRTC2Q53ET0 693 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 SOGA3Q5TF21 947 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ARMC3Q5W041 872 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC102BQ68D86 513 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 OGFOD2Q6N063 350 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 NFXL1Q6ZNB6 911 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 PHC3Q8NDX5 983 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 GAS2L2Q8NHY3 880 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 HELQQ8TDG4 1101 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 TAF4BQ92750 862 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF594Q96JF6 807 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 IWS1Q96ST2 819 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 SLX1AQ9BQ83 275 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 PNNQ9H307 717 aaKnown RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 NEUROD4Q9HD90 331 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CHST12Q9NRB3 414 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 SMC4Q9NTJ3 1288 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CLIC5Q9NZA1 410 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 SCHIP1Q9P0W5 487 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 IP6K2Q9UHH9 426 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ADGRE2Q9UHX3 823 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 MAFFQ9ULX9 164 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 RABL2BQ9UNT1 228 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF232Q9UNY5 417 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 KCNH4Q9UQ05 1017 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 LZTS1Q9Y250 596 aa3.31□□□□□ -1.88
FDFT1-216ENST00000529521 GPC6Q9Y625 555 aaPredicted RBP3.31□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC163A0A0D9SF12 145 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ANKRD18BA2A2Z9 1011 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ANKRD33BA6NCL7 494 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TMEM110-MUSTN1A8MSY1 372 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CHL1O00533 1208 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DNAJC6O75061 913 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DEAF1O75398 565 aaPredicted RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 RNASEH2AO75792 299 aaKnown RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 FOSP01100 380 aaPredicted RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 IGLV1-40P01703 118 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 C8AP07357 584 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SETSIPP0DME0 302 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CAPN2P17655 700 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 MAGEA8P43361 318 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TRAPPC10P48553 1259 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ZNF131P52739 623 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 RBM5P52756 815 aaKnown RBP eCLIP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SEC13P55735 322 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CLDN10P78369 228 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 AMPD3Q01432 767 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TYRO3Q06418 890 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CCDC15Q0P6D6 951 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DPYDQ12882 1025 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SEPT2Q15019 361 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TAF11Q15544 211 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 GRIK5Q16478 980 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DNAJC21Q5F1R6 531 aaKnown RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SYCP2LQ5T4T6 812 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SH3PXD2AQ5TCZ1 1133 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CCSAPQ6IQ19 270 aaPredicted RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ARHGEF25Q86VW2 580 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ANKMY2Q8IV38 441 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 MIGA1Q8NAN2 632 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 KLHL23Q8NBE8 558 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 SLC43A3Q8NBI5 491 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 MNS1Q8NEH6 495 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 C17orf50Q8WW18 174 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 GIMAP1Q8WWP7 306 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ATRIPQ8WXE1 791 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 JARID2Q92833 1246 aaPredicted RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TSR2Q969E8 191 aaKnown RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TEKT1Q969V4 418 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 MPP4Q96JB8 637 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 HSH2DQ96JZ2 352 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 HINFPQ9BQA5 517 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 TINF2Q9BSI4 451 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 IER2Q9BTL4 223 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 BACH2Q9BYV9 841 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 RWDD1Q9H446 243 aaPredicted RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 AKTIPQ9H8T0 292 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 RMI1Q9H9A7 625 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 AS3MTQ9HBK9 375 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 DNAJB12Q9NXW2 375 aaKnown RBP3.3□□□□□ -1.88
FDFT1-216ENST00000529521 HOXC10Q9NYD6 342 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 ASAP1Q9ULH1 1129 aa3.3□□□□□ -1.88
FDFT1-216ENST00000529521 CHMP3Q9Y3E7 222 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms