RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DUSP27Q5VZP5 1158 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 SMYD4Q8IYR2 804 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-212ENST00000529046 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 DISC1Q9NRI5 854 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 C1GALT1Q9NS00 363 aa7.85□□□□□ -1.15
CSDE1-212ENST00000529046 IFT140Q96RY7 1462 aa7.84□□□□□ -1.15
CSDE1-212ENST00000529046 SCAMP3O14828 347 aaKnown RBP7.84□□□□□ -1.15
CSDE1-212ENST00000529046 CYP26A1O43174 497 aa7.84□□□□□ -1.15
CSDE1-212ENST00000529046 RNGTTO60942 597 aaKnown RBP7.84□□□□□ -1.15
CSDE1-212ENST00000529046 HCLS1P14317 486 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-212ENST00000529046 BMP6P22004 513 aa7.84□□□□□ -1.15
CSDE1-212ENST00000529046 ERMP1Q7Z2K6 904 aa7.84□□□□□ -1.15
CSDE1-212ENST00000529046 METTL16Q86W50 562 aaKnown RBP7.84□□□□□ -1.15
CSDE1-212ENST00000529046 TTF2Q9UNY4 1162 aaKnown RBP7.84□□□□□ -1.15
CSDE1-212ENST00000529046 E9PSI1 815 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 CELA3AP09093 270 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 LRRC14Q15048 493 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 MSMPQ1L6U9 139 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 ZC3H12AQ5D1E8 599 aaKnown RBP7.83□□□□□ -1.16
CSDE1-212ENST00000529046 SCARA3Q6AZY7 606 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 LLGL2Q6P1M3 1020 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 ZNF765Q7L2R6 523 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 GRIN3AQ8TCU5 1115 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
CSDE1-212ENST00000529046 TRIM37O94972 964 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 WNT11O96014 354 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 GP2P55259 537 aaKnown RBP7.82□□□□□ -1.16
CSDE1-212ENST00000529046 RPS26P62854 115 aaKnown RBP7.82□□□□□ -1.16
CSDE1-212ENST00000529046 ERVK-24P63145 666 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 TSNAXIP1Q2TAA8 658 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 PCNX4Q63HM2 1172 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 MPRIPQ6WCQ1 1025 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 RSRP1Q9BUV0 290 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 LRRC4CQ9HCJ2 640 aa7.82□□□□□ -1.16
CSDE1-212ENST00000529046 ADAMTS4O75173 837 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 NEFMP07197 916 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 RLBP1P12271 317 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 CDK5R2Q13319 367 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 CCDC85BQ15834 202 aaPredicted RBP7.81□□□□□ -1.16
CSDE1-212ENST00000529046 OGFOD3Q6PK18 319 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 TMEM87AQ8NBN3 555 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 RNF214Q8ND24 703 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 SSU72Q9NP77 194 aaKnown RBP7.81□□□□□ -1.16
CSDE1-212ENST00000529046 PCOLCE2Q9UKZ9 415 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 ANGEL1Q9UNK9 670 aaKnown RBP7.81□□□□□ -1.16
CSDE1-212ENST00000529046 CYP8B1Q9UNU6 501 aa7.81□□□□□ -1.16
CSDE1-212ENST00000529046 TOPBP1Q92547 1522 aa7.8□□□□□ -1.16
CSDE1-212ENST00000529046 CYP27C1Q4G0S4 372 aa7.8□□□□□ -1.16
CSDE1-212ENST00000529046 RASIP1Q5U651 963 aa7.8□□□□□ -1.16
CSDE1-212ENST00000529046 ISL2Q96A47 359 aa7.8□□□□□ -1.16
CSDE1-212ENST00000529046 KCNQ5Q9NR82 932 aa7.8□□□□□ -1.16
CSDE1-212ENST00000529046 FAM87AP0C7U9 286 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 ZNF76P36508 570 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 HDLBPQ00341 1268 aaKnown RBP7.79□□□□□ -1.16
CSDE1-212ENST00000529046 AGMOQ6ZNB7 445 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 RHOVQ96L33 236 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 PICK1Q9NRD5 415 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 PCDHA4Q9UN74 947 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 CSADQ9Y600 493 aa7.79□□□□□ -1.16
CSDE1-212ENST00000529046 OAS3Q9Y6K5 1087 aaKnown RBP7.79□□□□□ -1.16
CSDE1-212ENST00000529046 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 TCF3P15923 654 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 LIG3P49916 1009 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 VSIG10LQ86VR7 867 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.78□□□□□ -1.16
CSDE1-212ENST00000529046 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 BSDC1Q9NW68 430 aaPredicted RBP7.78□□□□□ -1.16
CSDE1-212ENST00000529046 CCDC39Q9UFE4 941 aa7.78□□□□□ -1.16
CSDE1-212ENST00000529046 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
CSDE1-212ENST00000529046 DNMBPQ6XZF7 1577 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 PRNPP04156 253 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 PPM1JQ5JR12 505 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 TTBK2Q6IQ55 1244 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 HS2ST1Q7LGA3 356 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 RNF34Q969K3 372 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 ELMO3Q96BJ8 720 aa7.77□□□□□ -1.17
CSDE1-212ENST00000529046 ZNF608Q9ULD9 1512 aaPredicted RBP7.77□□□□□ -1.17
CSDE1-212ENST00000529046 IRAK1P51617 712 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 RAD51AP2Q09MP3 1159 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 PWP1Q13610 501 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 NPM2Q86SE8 214 aaKnown RBP7.76□□□□□ -1.17
CSDE1-212ENST00000529046 C12orf40Q86WS4 652 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 GAL3ST3Q96A11 431 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 TMEM74Q96NL1 305 aa7.76□□□□□ -1.17
CSDE1-212ENST00000529046 FANCGO15287 622 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 TFE3P19532 575 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-212ENST00000529046 GARTP22102 1010 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 MCTP1Q6DN14 999 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 CCDC84Q86UT8 332 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-212ENST00000529046 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 DUSP23Q9BVJ7 150 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 COPRSQ9NQ92 184 aa7.75□□□□□ -1.17
CSDE1-212ENST00000529046 DDX41Q9UJV9 622 aaKnown RBP7.75□□□□□ -1.17
CSDE1-212ENST00000529046 LEFTY1O75610 366 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 LMNB1P20700 586 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 NTF4P34130 210 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 LMNB2Q03252 620 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 RING1Q06587 406 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 ZBTB37Q5TC79 503 aa7.74□□□□□ -1.17
CSDE1-212ENST00000529046 TOP6BLQ8N6T0 577 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms