RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 TTC38Q5R3I4 469 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC121Q6ZUS5 278 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TM6SF1Q9BZW5 370 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 NUCKS1Q9H1E3 243 aaKnown RBP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 ARPP21Q9UBL0 812 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 PTPRTO14522 1441 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TRAF5O00463 557 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 GNA14O95837 355 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 CALCOCO2Q13137 446 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 PAK1Q13153 545 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 GRM1Q13255 1194 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 MCM6Q14566 821 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 AATFQ9NY61 560 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 TRIM35Q9UPQ4 493 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 AGTPBP1Q9UPW5 1226 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 MLH3Q9UHC1 1453 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 SP4Q02446 784 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC122Q5T0U0 273 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 NCAPH2Q6IBW4 605 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 SMC6Q96SB8 1091 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 NAPGQ99747 312 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 FAM169AQ9Y6X4 670 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 UBL4BQ8N7F7 174 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 ZNF594Q96JF6 807 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 ZBED4O75132 1171 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 SLC8A3P57103 927 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 NONOQ15233 471 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC6Q16204 474 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 UBLCP1Q8WVY7 318 aaPredicted RBP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 DBNDD2Q9BQY9 259 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 TXNDC16Q9P2K2 825 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC169A6NNP5 214 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 PPP2R3AQ06190 1150 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 ERO1AQ96HE7 468 aa9.49□□□□□ -0.89
CTNND1-219ENST00000528621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.49□□□□□ -0.89
CTNND1-219ENST00000528621 KDM3AQ9Y4C1 1321 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 RHOXF2BP0C7M4 288 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ATP5JP18859 108 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 BIRC3Q13489 604 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TAF12Q16514 161 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 IGSF22Q8N9C0 903 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TTC16Q8NEE8 873 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 RHOXF2Q9BQY4 288 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 DDX23Q9BUQ8 820 aaKnown RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 VPS18Q9P253 973 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 SWAP70Q9UH65 585 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 RSPH14Q9UHP6 348 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 CPA1P15085 419 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 SYCE1Q8N0S2 351 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ATRIPQ8WXE1 791 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 MYOM2P54296 1465 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ATP7BP35670 1465 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 H0YIN7 160 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 EIF6P56537 245 aaKnown RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TIMM10P62072 90 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 GABPB2Q8TAK5 448 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TRERF1Q96PN7 1200 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 OGFRQ9NZT2 677 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ANAPC4Q9UJX5 808 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 PNMA2Q9UL42 364 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC117Q8IWD4 279 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 PPP1R9BQ96SB3 815 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC94Q9BW85 323 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 V9GY48 417 aaPredicted RBP9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TTC37Q6PGP7 1564 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 ABCC4O15439 1325 aa9.48□□□□□ -0.89
CTNND1-219ENST00000528621 SMIM23A6NLE4 172 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 TRPC3Q13507 836 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 BRDTQ58F21 947 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 FAM76AQ8TAV0 307 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 MAIP1Q8WWC4 291 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 SAMD15Q9P1V8 674 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ODF2LQ9ULJ1 636 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ARHGEF35A5YM69 484 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 TXKP42681 527 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 TMTC1Q8IUR5 882 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 NOX5Q96PH1 765 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 KCNK9Q9NPC2 374 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 CETN3O15182 167 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 SETDB1Q15047 1291 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 CALCRLQ16602 461 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 MAP7D1Q3KQU3 841 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ZFP91Q96JP5 570 aaPredicted RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 LGR6Q9HBX8 967 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ZNF532Q9HCE3 1301 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 TAF5LO75529 589 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
CTNND1-219ENST00000528621 KRT9P35527 623 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 GALNT17Q6IS24 598 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC25Q86WR0 208 aa9.47□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC51Q96ER9 411 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms