RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SPNS2Q8IVW8 549 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 SULF1Q8IWU6 871 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 LCORLQ8N3X6 602 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 MIGA1Q8NAN2 632 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 CCDC17Q96LX7 622 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 MXD3Q9BW11 206 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 TMEM121BQ9BXQ6 578 aaPredicted RBP7.4□□□□□ -1.22
MACF1-228ENST00000528611 USP26Q9BXU7 913 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 TBC1D2Q9BYX2 928 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 LSG1Q9H089 658 aaKnown RBP7.4□□□□□ -1.22
MACF1-228ENST00000528611 TDRD3Q9H7E2 651 aaKnown RBP7.4□□□□□ -1.22
MACF1-228ENST00000528611 CNNM2Q9H8M5 875 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 ARMT1Q9H993 441 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 SYNPO2Q9UMS6 1093 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 PCDHB13Q9Y5F0 798 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 FLT1P17948 1338 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 ROBO3Q96MS0 1386 aa7.4□□□□□ -1.22
MACF1-228ENST00000528611 UTRNP46939 3433 aa7.4□□□□□ -1.23
MACF1-228ENST00000528611 ADAMTSL1Q8N6G6 1762 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 WDR19Q8NEZ3 1342 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 M0R2C6 588 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 APPP05067 770 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 RBM25P49756 843 aaKnown RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 HIRAP54198 1017 aaPredicted RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 NBPF9Q3BBW0 867 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 TBC1D10BQ4KMP7 808 aaPredicted RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 DCAF15Q66K64 600 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 SAMD7Q7Z3H4 446 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 ZNF589Q86UQ0 364 aaPredicted RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 FBXL16Q8N461 479 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 SH3RF3Q8TEJ3 882 aaPredicted RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 SEC62Q99442 399 aaKnown RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 TM6SF1Q9BZW5 370 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 KRT23Q9C075 422 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 DEFB129Q9H1M3 183 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 GPBP1L1Q9HC44 474 aaPredicted RBP7.39□□□□□ -1.23
MACF1-228ENST00000528611 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 FAM198AQ9UFP1 575 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 SERPINB13Q9UIV8 391 aa7.39□□□□□ -1.23
MACF1-228ENST00000528611 USP17L12C9JPN9 530 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 USP17L21D6R901 530 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 ORC4O43929 436 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
MACF1-228ENST00000528611 TOMM70O94826 608 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 POLR3DP05423 398 aaPredicted RBP7.38□□□□□ -1.23
MACF1-228ENST00000528611 PSMA5P28066 241 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 TDO2P48775 406 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 DYNLL1P63167 89 aaKnown RBP7.38□□□□□ -1.23
MACF1-228ENST00000528611 GABPAQ06546 454 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 PPARAQ07869 468 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 FSTL1Q12841 308 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 TRDNQ13061 729 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 RASA3Q14644 834 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 MAP3K11Q16584 847 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 ANGEL2Q5VTE6 544 aaKnown RBP7.38□□□□□ -1.23
MACF1-228ENST00000528611 TATDN1Q6P1N9 297 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 CTR9Q6PD62 1173 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 C16orf86Q6ZW13 317 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 RBM46Q8TBY0 533 aaKnown RBP7.38□□□□□ -1.23
MACF1-228ENST00000528611 TGFBRAP1Q8WUH2 860 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 CHMP4CQ96CF2 233 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 RRAGCQ9HB90 399 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 MCM9Q9NXL9 1143 aa7.38□□□□□ -1.23
MACF1-228ENST00000528611 CNTNAP1P78357 1384 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 FOXP2O15409 715 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 IRX5P78411 483 aaPredicted RBP7.37□□□□□ -1.23
MACF1-228ENST00000528611 AKNAD1Q5T1N1 836 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 RBM26Q5T8P6 1007 aaKnown RBP7.37□□□□□ -1.23
MACF1-228ENST00000528611 MFSD6Q6ZSS7 791 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 KRT26Q7Z3Y9 468 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 SKAP1Q86WV1 359 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 TMTC2Q8N394 836 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 SMC1BQ8NDV3 1235 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 TRPM4Q8TD43 1214 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 SDR42E1Q8WUS8 393 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 TEPSINQ96N21 525 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 TTC14Q96N46 770 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 CSRNP1Q96S65 589 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 ALDH8A1Q9H2A2 487 aaPredicted RBP7.37□□□□□ -1.23
MACF1-228ENST00000528611 TCP11L1Q9NUJ3 509 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 GGA3Q9NZ52 723 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 ZNF112Q9UJU3 913 aa7.37□□□□□ -1.23
MACF1-228ENST00000528611 RBM8AQ9Y5S9 174 aaKnown RBP7.37□□□□□ -1.23
MACF1-228ENST00000528611 CDK5RAP2Q96SN8 1893 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 DDX60LQ5H9U9 1706 aaKnown RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 CTNND1O60716 968 aaKnown RBP7.36□□□□□ -1.23
MACF1-228ENST00000528611 EGFRP00533 1210 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 ASNSP08243 561 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 CYP21A2P08686 494 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 YY1P25490 414 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 RCAN1P53805 252 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 PTH1RQ03431 593 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 NFIAQ12857 509 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 PPP2R5BQ15173 497 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 CREB3L3Q68CJ9 461 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 IFNL1Q8IU54 200 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
MACF1-228ENST00000528611 ZSCAN29Q8IWY8 852 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms