RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 HERC5Q9UII4 1024 aaKnown RBP20.36■□□□□ 0.85
HIF3A-211ENST00000528563 FAM196BA6NMK8 535 aa20.35■□□□□ 0.85
HIF3A-211ENST00000528563 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
HIF3A-211ENST00000528563 ZSCAN25Q6NSZ9 544 aa20.35■□□□□ 0.85
HIF3A-211ENST00000528563 CFHR5Q9BXR6 569 aa20.35■□□□□ 0.85
HIF3A-211ENST00000528563 SAP30BPQ9UHR5 308 aaKnown RBP20.35■□□□□ 0.85
HIF3A-211ENST00000528563 LAMB1P07942 1786 aa20.35■□□□□ 0.85
HIF3A-211ENST00000528563 FOCADQ5VW36 1801 aa20.35■□□□□ 0.85
HIF3A-211ENST00000528563 ALDH1A1P00352 501 aa20.34■□□□□ 0.85
HIF3A-211ENST00000528563 SCYL3Q8IZE3 742 aa20.34■□□□□ 0.85
HIF3A-211ENST00000528563 LCORLQ8N3X6 602 aa20.34■□□□□ 0.85
HIF3A-211ENST00000528563 BRI3BPQ8WY22 251 aa20.34■□□□□ 0.85
HIF3A-211ENST00000528563 CRNKL1Q9BZJ0 848 aaKnown RBP20.34■□□□□ 0.85
HIF3A-211ENST00000528563 TBC1D8O95759 1140 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 PTPRAP18433 802 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 PDE1AP54750 535 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 NUCB1Q02818 461 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 B4GALNT3Q6L9W6 998 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 KCNH4Q9UQ05 1017 aa20.33■□□□□ 0.85
HIF3A-211ENST00000528563 CETPP11597 493 aa20.32■□□□□ 0.84
HIF3A-211ENST00000528563 SNAPC2Q13487 334 aa20.32■□□□□ 0.84
HIF3A-211ENST00000528563 RRP1BQ14684 758 aaKnown RBP20.32■□□□□ 0.84
HIF3A-211ENST00000528563 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
HIF3A-211ENST00000528563 ARMT1Q9H993 441 aa20.32■□□□□ 0.84
HIF3A-211ENST00000528563 PICK1Q9NRD5 415 aa20.32■□□□□ 0.84
HIF3A-211ENST00000528563 CCL15-CCL14A0A0B4J2E2 113 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 RNF113AO15541 343 aaKnown RBP20.31■□□□□ 0.84
HIF3A-211ENST00000528563 CAP2P40123 477 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 CCL15Q16663 113 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 OTUD7BQ6GQQ9 843 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 CHD1LQ86WJ1 897 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 PUS7LQ9H0K6 701 aaKnown RBP20.31■□□□□ 0.84
HIF3A-211ENST00000528563 R3HDMLQ9H3Y0 253 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 DNAJC18Q9H819 358 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 ZHX2Q9Y6X8 837 aa20.31■□□□□ 0.84
HIF3A-211ENST00000528563 MBD4O95243 580 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 HLA-DOAP06340 250 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 ZFYP08048 801 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-211ENST00000528563 NOM1Q5C9Z4 860 aaKnown RBP20.3■□□□□ 0.84
HIF3A-211ENST00000528563 TTC6Q86TZ1 520 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 DCP1AQ9NPI6 582 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-211ENST00000528563 CASP8AP2Q9UKL3 1982 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 CXCL11O14625 94 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 PRKAB2O43741 272 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 CRACR2BQ8N4Y2 399 aaPredicted RBP20.3■□□□□ 0.84
HIF3A-211ENST00000528563 SDR42E1Q8WUS8 393 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 EHD4Q9H223 541 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
HIF3A-211ENST00000528563 MYH7P12883 1935 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 PLCD1P51178 756 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 SLC4A8Q2Y0W8 1093 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 FAM43AQ8N2R8 423 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 OSBP2Q969R2 916 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 ATP8A2Q9NTI2 1148 aa20.29■□□□□ 0.84
HIF3A-211ENST00000528563 MYH1P12882 1939 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 JAG1P78504 1218 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 MOGSQ13724 837 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
HIF3A-211ENST00000528563 APPBP2Q92624 585 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 STRBPQ96SI9 672 aaKnown RBP20.28■□□□□ 0.84
HIF3A-211ENST00000528563 MCM9Q9NXL9 1143 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 SERPINB13Q9UIV8 391 aa20.28■□□□□ 0.84
HIF3A-211ENST00000528563 BTBD19C9JJ37 291 aa20.27■□□□□ 0.84
HIF3A-211ENST00000528563 GPR25O00155 361 aa20.27■□□□□ 0.84
HIF3A-211ENST00000528563 TATDN1Q6P1N9 297 aa20.27■□□□□ 0.84
HIF3A-211ENST00000528563 PLEKHM2Q8IWE5 1019 aa20.27■□□□□ 0.84
HIF3A-211ENST00000528563 TNS4Q8IZW8 715 aa20.27■□□□□ 0.84
HIF3A-211ENST00000528563 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.27■□□□□ 0.84
HIF3A-211ENST00000528563 POLR3DP05423 398 aaPredicted RBP20.26■□□□□ 0.83
HIF3A-211ENST00000528563 CRHR2Q13324 411 aa20.26■□□□□ 0.83
HIF3A-211ENST00000528563 CCDC84Q86UT8 332 aaPredicted RBP20.26■□□□□ 0.83
HIF3A-211ENST00000528563 TRIM34Q9BYJ4 488 aa20.26■□□□□ 0.83
HIF3A-211ENST00000528563 OSBPL3Q9H4L5 887 aa20.26■□□□□ 0.83
HIF3A-211ENST00000528563 ZCCHC17Q9NP64 241 aaKnown RBP20.26■□□□□ 0.83
HIF3A-211ENST00000528563 GABPAQ06546 454 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 ZNF296Q8WUU4 475 aaPredicted RBP20.25■□□□□ 0.83
HIF3A-211ENST00000528563 EVI5LQ96CN4 794 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 FSD1Q9BTV5 496 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 GINM1Q9NU53 330 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 SLC4A4Q9Y6R1 1079 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 DOCK1Q14185 1865 aa20.25■□□□□ 0.83
HIF3A-211ENST00000528563 A0A0G2JLL6 359 aaPredicted RBP20.24■□□□□ 0.83
HIF3A-211ENST00000528563 USP17L5A8MUK1 530 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 ASNSP08243 561 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 EVX2Q03828 476 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 PRRT2Q7Z6L0 340 aaPredicted RBP20.24■□□□□ 0.83
HIF3A-211ENST00000528563 ANKRD23Q86SG2 305 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 GSG1L2A8MUP6 293 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 CYP2D6P10635 497 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 TBC1D2Q9BYX2 928 aa20.24■□□□□ 0.83
HIF3A-211ENST00000528563 PHIPQ8WWQ0 1821 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 DDX60LQ5H9U9 1706 aaKnown RBP20.23■□□□□ 0.83
HIF3A-211ENST00000528563 TRIM75PA6NK02 468 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 USP17L12C9JPN9 530 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 USP17L21D6R901 530 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 M0R2C6 588 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 SHMT1P34896 483 aa20.23■□□□□ 0.83
HIF3A-211ENST00000528563 SPP2Q13103 211 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms