RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 LOC285556D6RIA3 1793 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 IFIT2P09913 472 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 PPP4CP60510 307 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 FASTKD5Q7L8L6 764 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 TRIM34Q9BYJ4 488 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 DHX36Q9H2U1 1008 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 NDUFB9Q9Y6M9 179 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 FLT1P17948 1338 aa16.94■□□□□ 0.3
CHRDL2-205ENST00000528471 TNRC18O15417 2968 aaPredicted RBP16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 TRIM75PA6NK02 468 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 RAB11FIP3O75154 756 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 C20orf194Q5TEA3 1177 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 SIRT2Q8IXJ6 389 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 PI4KBQ9UBF8 816 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 CPA4Q9UI42 421 aa16.93■□□□□ 0.3
CHRDL2-205ENST00000528471 A0A0G2JLL6 359 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 LACTBP83111 547 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 MOGSQ13724 837 aa16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 PRRT2Q7Z6L0 340 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 CERS3Q8IU89 383 aa16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 AFG3L2Q9Y4W6 797 aa16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 MYH8P13535 1937 aa16.92■□□□□ 0.3
CHRDL2-205ENST00000528471 DYNLL1P63167 89 aaKnown RBP16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 CAP1Q01518 475 aa16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 TTF1Q15361 905 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 TMED8Q6PL24 325 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 CCDC84Q86UT8 332 aaPredicted RBP16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 ANTXR1Q9H6X2 564 aa16.91■□□□□ 0.3
CHRDL2-205ENST00000528471 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 HLA-DOAP06340 250 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 CAP2P40123 477 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 USP5P45974 858 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 GPAT2Q6NUI2 795 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 C17orf99Q6UX52 265 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 ARHGAP39Q9C0H5 1083 aa16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
CHRDL2-205ENST00000528471 DDX60LQ5H9U9 1706 aaKnown RBP16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 ADGRA2Q96PE1 1338 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 GNRH1P01148 92 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 CYP2C8P10632 490 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 SLC9C1Q4G0N8 1177 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 PTCH2Q9Y6C5 1203 aa16.89■□□□□ 0.29
CHRDL2-205ENST00000528471 GOLIM4O00461 696 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 ZNF280CQ8ND82 737 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 SMCR8Q8TEV9 937 aaPredicted RBP16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 ARMC5Q96C12 935 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 AS3MTQ9HBK9 375 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 SLC45A1Q9Y2W3 748 aa16.88■□□□□ 0.29
CHRDL2-205ENST00000528471 USP17L5A8MUK1 530 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 ASNSP08243 561 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 PSMC4P43686 418 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 SPP2Q13103 211 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 SLC9C2Q5TAH2 1124 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 NBPF11Q86T75 865 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 FOXP4Q8IVH2 680 aaPredicted RBP16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 LRRCC1Q9C099 1032 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 PNMA3Q9UL41 463 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 AGTPBP1Q9UPW5 1226 aa16.87■□□□□ 0.29
CHRDL2-205ENST00000528471 BAZ2AQ9UIF9 1905 aaKnown RBP16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 MAGEB6P1A0A0J9YX57 407 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 PDE6AP16499 860 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 PRMT2P55345 433 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 RRP1BQ14684 758 aaKnown RBP16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 PROCA1Q8NCQ7 364 aaPredicted RBP16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 DNAJC18Q9H819 358 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 BRCA2P51587 3418 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
CHRDL2-205ENST00000528471 BCRP11274 1271 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 HOXD10P28358 340 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 HMGCS2P54868 508 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 FCGRTP55899 365 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 METTL16Q86W50 562 aaKnown RBP16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 TRIM47Q96LD4 638 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 PAG1Q9NWQ8 432 aa16.85■□□□□ 0.29
CHRDL2-205ENST00000528471 ZNF532Q9HCE3 1301 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 GDF11O95390 407 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 PABPC4Q13310 644 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 TREML2Q5T2D2 321 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 TMEM106CQ9BVX2 250 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 BOLA2Q9H3K6 86 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 GINM1Q9NU53 330 aa16.84■□□□□ 0.29
CHRDL2-205ENST00000528471 ZBTB21Q9ULJ3 1066 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms