RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 KIF22Q14807 665 aa11.02□□□□□ -0.65
CMTM1-210ENST00000528441 SCYL3Q8IZE3 742 aa11.02□□□□□ -0.65
CMTM1-210ENST00000528441 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
CMTM1-210ENST00000528441 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
CMTM1-210ENST00000528441 SAP30BPQ9UHR5 308 aaKnown RBP11.02□□□□□ -0.65
CMTM1-210ENST00000528441 MYO5AQ9Y4I1 1855 aaKnown RBP11.02□□□□□ -0.65
CMTM1-210ENST00000528441 SMARCA5O60264 1052 aaPredicted RBP11.01□□□□□ -0.65
CMTM1-210ENST00000528441 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
CMTM1-210ENST00000528441 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
CMTM1-210ENST00000528441 CD99L2Q8TCZ2 262 aa11.01□□□□□ -0.65
CMTM1-210ENST00000528441 BRI3BPQ8WY22 251 aa11.01□□□□□ -0.65
CMTM1-210ENST00000528441 ZNF512BQ96KM6 892 aaPredicted RBP11.01□□□□□ -0.65
CMTM1-210ENST00000528441 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.01□□□□□ -0.65
CMTM1-210ENST00000528441 ANTXR1Q9H6X2 564 aa11.01□□□□□ -0.65
CMTM1-210ENST00000528441 ZHX2Q9Y6X8 837 aa11.01□□□□□ -0.65
CMTM1-210ENST00000528441 MAGEB6P1A0A0J9YX57 407 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 TRIM75PA6NK02 468 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 RHBDL3P58872 404 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 SP3Q02447 781 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 PKN2Q16513 984 aaKnown RBP11□□□□□ -0.65
CMTM1-210ENST00000528441 SLC9C2Q5TAH2 1124 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 CERS3Q8IU89 383 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 DHX36Q9H2U1 1008 aaKnown RBP11□□□□□ -0.65
CMTM1-210ENST00000528441 DOCK1Q14185 1865 aa11□□□□□ -0.65
CMTM1-210ENST00000528441 BTBD19C9JJ37 291 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
CMTM1-210ENST00000528441 NOL9Q5SY16 702 aaKnown RBP10.99□□□□□ -0.65
CMTM1-210ENST00000528441 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 FAM43AQ8N2R8 423 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 ZNF384Q8TF68 577 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 CRBNQ96SW2 442 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 CRNKL1Q9BZJ0 848 aaKnown RBP10.99□□□□□ -0.65
CMTM1-210ENST00000528441 R3HDMLQ9H3Y0 253 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 AS3MTQ9HBK9 375 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 PI4KBQ9UBF8 816 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 FLT1P17948 1338 aa10.99□□□□□ -0.65
CMTM1-210ENST00000528441 PDHXO00330 501 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 CTNND1O60716 968 aaKnown RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 IGSF3O75054 1194 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 SLURP2P0DP57 97 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 SOX10P56693 466 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 ZSCAN25Q6NSZ9 544 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 FASTKD5Q7L8L6 764 aaKnown RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 ADGRA1Q86SQ6 560 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 CCDC84Q86UT8 332 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 SMCR8Q8TEV9 937 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 MS4A4AQ96JQ5 239 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 PARK7Q99497 189 aaKnown RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 PTPN18Q99952 460 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 HERC5Q9UII4 1024 aaKnown RBP10.98□□□□□ -0.65
CMTM1-210ENST00000528441 ZNF112Q9UJU3 913 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 PALD1Q9ULE6 856 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 ZNF532Q9HCE3 1301 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 RFX7Q2KHR2 1363 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 ATAD5Q96QE3 1844 aa10.98□□□□□ -0.65
CMTM1-210ENST00000528441 MYH1P12882 1939 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 TESPA1A2RU30 521 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-210ENST00000528441 GDF11O95390 407 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 PDE6AP16499 860 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 PTPRAP18433 802 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 FBXO46Q6PJ61 603 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-210ENST00000528441 TTC6Q86TZ1 520 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.97□□□□□ -0.65
CMTM1-210ENST00000528441 EDC3Q96F86 508 aaKnown RBP10.97□□□□□ -0.65
CMTM1-210ENST00000528441 FEZ1Q99689 392 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 TMOD4Q9NZQ9 345 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.97□□□□□ -0.65
CMTM1-210ENST00000528441 CPA4Q9UI42 421 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 HPS5Q9UPZ3 1129 aa10.97□□□□□ -0.65
CMTM1-210ENST00000528441 NAV1Q8NEY1 1877 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 ATRNL1Q5VV63 1379 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 USP17L5A8MUK1 530 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 MPHOSPH10O00566 681 aaKnown RBP10.96□□□□□ -0.65
CMTM1-210ENST00000528441 CXCL11O14625 94 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 FMNL1O95466 1100 aaPredicted RBP10.96□□□□□ -0.65
CMTM1-210ENST00000528441 PPP4CP60510 307 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 NOM1Q5C9Z4 860 aaKnown RBP10.96□□□□□ -0.65
CMTM1-210ENST00000528441 ANKRD23Q86SG2 305 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 CFHR5Q9BXR6 569 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 CWC22Q9HCG8 908 aaKnown RBP10.96□□□□□ -0.65
CMTM1-210ENST00000528441 CABP5Q9NP86 173 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
CMTM1-210ENST00000528441 CDK5RAP2Q96SN8 1893 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
CMTM1-210ENST00000528441 PHF20L1A8MW92 1017 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 ERC2O15083 957 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 TBC1D12O60347 775 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 TLR2O60603 784 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 MBD4O95243 580 aa10.95□□□□□ -0.66
CMTM1-210ENST00000528441 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms