RNA–Protein interactions for RNA: ENST00000528039.5

RBM4-210, Transcript of RNA binding motif protein 4, human

TSL 3

Gene RBM4, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-210	ENST00000528039	TBC1D12	O60347	775 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	MNX1	P50219	401 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	SLFN5	Q08AF3	891 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	SPP2	Q13103	211 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	NECAB2	Q7Z6G3	386 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	C7orf61	Q8IZ16	206 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	GJD2	Q9UKL4	321 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039	PNMA3	Q9UL41	463 aa		13.59	□□□□□ -0.23
RBM4-210	ENST00000528039		A0A1B0GUL7	405 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	HMGCR	P04035	888 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	CAPN2	P17655	700 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	HMGCS2	P54868	508 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	TFCP2	Q12800	502 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	PI16	Q6UXB8	463 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	SLF2	Q8IX21	1173 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	ZNF280C	Q8ND82	737 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	CDCA7L	Q96GN5	454 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	XAGE2	Q96GT9	111 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	GDF15	Q99988	308 aa		13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	NOB1	Q9ULX3	412 aa	Known RBP	13.58	□□□□□ -0.24
RBM4-210	ENST00000528039	PEX10	O60683	326 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	TBC1D9	Q6ZT07	1266 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	ERICH6	Q7L0X2	663 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	ANKLE1	Q8NAG6	615 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	MEIS3	Q99687	375 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	HMG20B	Q9P0W2	317 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	LOC285556	D6RIA3	1793 aa		13.57	□□□□□ -0.24
RBM4-210	ENST00000528039	NPM3	O75607	178 aa	Known RBP	13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	SYN1	P17600	705 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	BMP8B	P34820	402 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	GCLC	P48506	637 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	TRIB2	Q92519	343 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	NSUN4	Q96CB9	384 aa	Known RBP	13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	NBPF3	Q9H094	633 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	HMX1	Q9NP08	348 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	RPTOR	Q8N122	1335 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	DOCK3	Q8IZD9	2030 aa		13.56	□□□□□ -0.24
RBM4-210	ENST00000528039	USP17L5	A8MUK1	530 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	CAP2	P40123	477 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	JAG1	P78504	1218 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	MVP	Q14764	893 aa	Known RBP	13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	SH3D19	Q5HYK7	790 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039		Q7L0L9	218 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	MORF4L1	Q9UBU8	362 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	VCAN	P13611	3396 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	PLXNB2	O15031	1838 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	COL2A1	P02458	1487 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	EYS	Q5T1H1	3165 aa		13.55	□□□□□ -0.24
RBM4-210	ENST00000528039	SRGAP3	O43295	1099 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	4e-9	■■■■■ 28.7
RBM4-210	ENST00000528039	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	MAP3K21	Q5TCX8	1036 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	TRMT2A	Q8IZ69	625 aa	Known RBP	13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	DEFB123	Q8N688	67 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	SPATA5	Q8NB90	893 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	NEUROD6	Q96NK8	337 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	C11orf49	Q9H6J7	331 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	TXNRD2	Q9NNW7	524 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	RAI14	Q9P0K7	980 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	AKAP2	Q9Y2D5	859 aa		13.54	□□□□□ -0.24
RBM4-210	ENST00000528039	SPTBN5	Q9NRC6	3674 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	DDX60L	Q5H9U9	1706 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	CYP2B6	P20813	491 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	MAGEA10	P43363	369 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	MTMR2	Q13614	643 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	TEX11	Q8IYF3	940 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	P2RX7	Q99572	595 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	TBC1D2	Q9BYX2	928 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	API5	Q9BZZ5	524 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	OGDHL	Q9ULD0	1010 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	PFAS	O15067	1338 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	ATAD5	Q96QE3	1844 aa		13.53	□□□□□ -0.24
RBM4-210	ENST00000528039	MAP4K4	O95819	1239 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	LDHC	P07864	332 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	PRKAR2A	P13861	404 aa	Known RBP	13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	ARID4A	P29374	1257 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	MCAM	P43121	646 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	GSTO1	P78417	241 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	LRIT3	Q3SXY7	679 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	GPR153	Q6NV75	609 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	WDR18	Q9BV38	432 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	DNAJC18	Q9H819	358 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	AS3MT	Q9HBK9	375 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	HERC5	Q9UII4	1024 aa	Known RBP	13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	HDAC5	Q9UQL6	1122 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	SIPA1L1	O43166	1804 aa		13.52	□□□□□ -0.25
RBM4-210	ENST00000528039	HOXA7	P31268	230 aa	Predicted RBP	13.51	□□□□□ -0.25
RBM4-210	ENST00000528039	BACE1	P56817	501 aa		13.51	□□□□□ -0.25
RBM4-210	ENST00000528039	HERVK_113	P62684	666 aa		13.51	□□□□□ -0.25
RBM4-210	ENST00000528039	IRX3	P78415	501 aa	Predicted RBP	13.51	□□□□□ -0.25
RBM4-210	ENST00000528039	MTX1	Q13505	466 aa		13.51	□□□□□ -0.25
RBM4-210	ENST00000528039		Q3C1V9	767 aa		13.51	□□□□□ -0.25
RBM4-210	ENST00000528039	POTEE	Q6S8J3	1075 aa		13.51	□□□□□ -0.25

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