RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 PYCARDQ9ULZ3 195 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 UQCRHLA0A096LP55 91 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 UQCRHP07919 91 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 RPS8P62241 208 aaKnown RBP17.74■□□□□ 0.43
USH1C-207ENST00000527720 SEC23AQ15436 765 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 NBPF11Q86T75 865 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 ZNF654Q8IZM8 581 aa17.74■□□□□ 0.43
USH1C-207ENST00000527720 FOXP1Q9H334 677 aaPredicted RBP17.74■□□□□ 0.43
USH1C-207ENST00000527720 CUTAO60888 179 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 NOSTRINQ8IVI9 506 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 CRACR2BQ8N4Y2 399 aaPredicted RBP17.73■□□□□ 0.43
USH1C-207ENST00000527720 FANCBQ8NB91 859 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 SDR42E1Q8WUS8 393 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 MROH7-TTC4A0A0A0MT08 1334 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 MINDY4BA8MYZ0 360 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 DYNC1I1O14576 645 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 NEMFO60524 1076 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 FGRP09769 529 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 SYKP43405 635 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 NLRP12P59046 1061 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 BICDL1Q6ZP65 573 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 NGLY1Q96IV0 654 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
USH1C-207ENST00000527720 IGSF3O75054 1194 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 ZPR1O75312 459 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 MARCKSP29966 332 aaPredicted RBP17.72■□□□□ 0.43
USH1C-207ENST00000527720 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 TNKSO95271 1327 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 TPTE2Q6XPS3 522 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 NBPF5PQ86XG9 351 aaPredicted RBP17.72■□□□□ 0.43
USH1C-207ENST00000527720 AOPEPQ8N6M6 819 aa17.72■□□□□ 0.43
USH1C-207ENST00000527720 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
USH1C-207ENST00000527720 RRP9O43818 475 aaKnown RBP17.71■□□□□ 0.43
USH1C-207ENST00000527720 RILPL1Q5EBL4 403 aa17.71■□□□□ 0.43
USH1C-207ENST00000527720 SHC4Q6S5L8 630 aa17.71■□□□□ 0.43
USH1C-207ENST00000527720 ELOA2Q8IYF1 753 aaPredicted RBP17.71■□□□□ 0.43
USH1C-207ENST00000527720 FNBP4Q8N3X1 1017 aaPredicted RBP17.71■□□□□ 0.43
USH1C-207ENST00000527720 SBF2Q86WG5 1849 aa17.71■□□□□ 0.42
USH1C-207ENST00000527720 DIS3L2Q8IYB7 885 aaKnown RBP17.7■□□□□ 0.42
USH1C-207ENST00000527720 C17orf53Q8N3J3 647 aaPredicted RBP17.7■□□□□ 0.42
USH1C-207ENST00000527720 MYRIPQ8NFW9 859 aa17.7■□□□□ 0.42
USH1C-207ENST00000527720 NSUN4Q96CB9 384 aaKnown RBP17.7■□□□□ 0.42
USH1C-207ENST00000527720 C8orf37Q96NL8 207 aa17.7■□□□□ 0.42
USH1C-207ENST00000527720 ZSCAN10Q96SZ4 725 aaPredicted RBP17.7■□□□□ 0.42
USH1C-207ENST00000527720 NRBP1Q9UHY1 535 aa17.7■□□□□ 0.42
USH1C-207ENST00000527720 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
USH1C-207ENST00000527720 HIBADHP31937 336 aaKnown RBP17.7■□□□□ 0.42
USH1C-207ENST00000527720 GUCY1A2P33402 732 aa17.7■□□□□ 0.42
USH1C-207ENST00000527720 SMTNL1A8MU46 457 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 CALM1P0DP23 149 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 CALM2P0DP24 149 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 CALM3P0DP25 149 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 TPM4P67936 248 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 DPCR1Q3MIW9 517 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 IQCA1Q86XH1 822 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 KRI1Q8N9T8 703 aaKnown RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 ZNF384Q8TF68 577 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 ERCC4Q92889 916 aaPredicted RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 RBM28Q9NW13 759 aaKnown RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 MORC2Q9Y6X9 1032 aaPredicted RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 BTBD18B2RXH4 712 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 GNPATO15228 680 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 XBP1P17861 261 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 KCNQ4P56696 695 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 DYNLL1P63167 89 aaKnown RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 ENAHQ8N8S7 591 aaPredicted RBP17.69■□□□□ 0.42
USH1C-207ENST00000527720 NUP133Q8WUM0 1156 aa17.69■□□□□ 0.42
USH1C-207ENST00000527720 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 UBE2Q2LH0YL09 131 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 IKBKBO14920 756 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 ATP8A2Q9NTI2 1148 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 SRP68Q9UHB9 627 aaKnown RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 CEP131Q9UPN4 1083 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 ORC4O43929 436 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 NT5C2P49902 561 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 AKAP17AQ02040 695 aaKnown RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 CCDC144BQ3MJ40 725 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 IFIT1BQ5T764 474 aaKnown RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 CTR9Q6PD62 1173 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 CATIPQ7Z7H3 387 aa17.68■□□□□ 0.42
USH1C-207ENST00000527720 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 CRNKL1Q9BZJ0 848 aaKnown RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 CCNL1Q9UK58 526 aaPredicted RBP17.68■□□□□ 0.42
USH1C-207ENST00000527720 A0A087WWV3 80 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 GTF2F1P35269 517 aaKnown RBP eCLIP17.67■□□□□ 0.42
USH1C-207ENST00000527720 MECOMQ03112 1051 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 LRRC8AQ8IWT6 810 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 STK11IPQ8N1F8 1099 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 ZNF579Q8NAF0 562 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 CACTINQ8WUQ7 758 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 IMPACTQ9P2X3 320 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 TNRC6CQ9HCJ0 1690 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 PRPF3O43395 683 aaKnown RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 DDAH1O94760 285 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 TOB1P50616 345 aaPredicted RBP17.67■□□□□ 0.42
USH1C-207ENST00000527720 LRMPQ12912 555 aa17.67■□□□□ 0.42
USH1C-207ENST00000527720 CHAF1AQ13111 956 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms