RNA–Protein interactions for RNA: ENST00000527498.1

PUM1-219, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-219	ENST00000527498	SH3PXD2A	Q5TCZ1	1133 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	NKX2-3	Q8TAU0	364 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	RHPN1	Q8TCX5	695 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	EPS8L3	Q8TE67	593 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	ABHD8	Q96I13	439 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	SRPK1	Q96SB4	655 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	ZFYVE28	Q9HCC9	887 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	RNF181	Q9P0P0	153 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	DMGDH	Q9UI17	866 aa	Known RBP	4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	C4A	P0C0L4	1744 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	TTC21A	Q8NDW8	1320 aa		4.94	□□□□□ -1.62
PUM1-219	ENST00000527498	PALLD	Q8WX93	1383 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	GADD45B	O75293	160 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	MMP10	P09238	476 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	DPEP1	P16444	411 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	EPB42	P16452	691 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	DEK	P35659	375 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	CTCF	P49711	727 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	ARSD	P51689	593 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	TGFB2	P61812	414 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	ZNF295-AS1	Q8N0V1	137 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	LTV1	Q96GA3	475 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	GPATCH3	Q96I76	525 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	BCO2	Q9BYV7	579 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	NSD3	Q9BZ95	1437 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	SPC25	Q9HBM1	224 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	KBTBD4	Q9NVX7	518 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	PARP3	Q9Y6F1	533 aa		4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	TNRC18	O15417	2968 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-219	ENST00000527498	MEGF6	O75095	1541 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	DICER1	Q9UPY3	1922 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-219	ENST00000527498		A6NHS1	94 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	CCDC85C	A6NKD9	419 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	MEN1	O00255	615 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	DNAJC6	O75061	913 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	TAT	P17735	454 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	NASP	P49321	788 aa	Predicted RBP	4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	LBX1	P52954	281 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	CHMP4BP1	P59074	171 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	NXPE4	Q6UWF7	544 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	GALNT12	Q8IXK2	581 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	CPLX3	Q8WVH0	158 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	AIDA	Q96BJ3	306 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	ZNF408	Q9H9D4	720 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	ZFYVE1	Q9HBF4	777 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	NPHS2	Q9NP85	383 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	ZDHHC3	Q9NYG2	299 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	PPM1H	Q9ULR3	514 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	TTF2	Q9UNY4	1162 aa	Known RBP	4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	COL4A3BP	Q9Y5P4	624 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	TLL2	Q9Y6L7	1015 aa		4.92	□□□□□ -1.62
PUM1-219	ENST00000527498	KTN1	Q86UP2	1357 aa	Known RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	RNF223	E7ERA6	249 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	PPEF1	O14829	653 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	SIAH2	O43255	324 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	VEGFA	P15692	232 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	KCNA3	P22001	575 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	HMGB2	P26583	209 aa	Known RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	GPC1	P35052	558 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	EIF4A3	P38919	411 aa	Known RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	PTGIR	P43119	386 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	RGS19	P49795	217 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	IDH3A	P50213	366 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	RAB33A	Q14088	237 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	CCDC85B	Q15834	202 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	PLEKHG4	Q58EX7	1191 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	TNNI3K	Q59H18	835 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	USPL1	Q5W0Q7	1092 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	PI16	Q6UXB8	463 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	ANKS3	Q6ZW76	656 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	FILIP1	Q7Z7B0	1213 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	TICAM2	Q86XR7	235 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	DCAF5	Q96JK2	942 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	SUV39H2	Q9H5I1	410 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	ELP3	Q9H9T3	547 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	C11orf16	Q9NQ32	467 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	COPRS	Q9NQ92	184 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	CNTNAP1	P78357	1384 aa		4.91	□□□□□ -1.62
PUM1-219	ENST00000527498	HSPA8	P11142	646 aa	Known RBP	4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	PTMS	P20962	102 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	GBP2	P32456	591 aa	Predicted RBP	4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	IRS1	P35568	1242 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	SOX9	P48436	509 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	PTPN5	P54829	565 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	RASSF7	Q02833	373 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	DALRD3	Q5D0E6	543 aa	Known RBP	4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	ARSH	Q5FYA8	562 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	DIEXF	Q68CQ4	756 aa	Known RBP	4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	MPRIP	Q6WCQ1	1025 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498		Q6ZVU0	165 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	NME9	Q86XW9	330 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	CMTR1	Q8N1G2	835 aa	Known RBP	4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	LINC00116	Q8NCU8	138 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	SUSD3	Q96L08	255 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	TMEM74	Q96NL1	305 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	DEPDC7	Q96QD5	511 aa		4.9	□□□□□ -1.63
PUM1-219	ENST00000527498	NT5C1A	Q9BXI3	368 aa		4.9	□□□□□ -1.63

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