RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 GJA5P36382 358 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 UBE3CQ15386 1083 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 COL13A1Q5TAT6 717 aaPredicted RBP16.13■□□□□ 0.17
CAPN1-209ENST00000527469 TTC6Q86TZ1 520 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 IFNL1Q8IU54 200 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 SMC5Q8IY18 1101 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 SCYL3Q8IZE3 742 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 RIOK1Q9BRS2 568 aaKnown RBP16.13■□□□□ 0.17
CAPN1-209ENST00000527469 FSD1Q9BTV5 496 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
CAPN1-209ENST00000527469 PHF20L1A8MW92 1017 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 TBC1D8O95759 1140 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 IGHDP01880 384 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-209ENST00000527469 MAP3K10Q02779 954 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 CHD1LQ86WJ1 897 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 FOXP4Q8IVH2 680 aaPredicted RBP16.12■□□□□ 0.17
CAPN1-209ENST00000527469 AMOTL1Q8IY63 956 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CAPN1-209ENST00000527469 IRF6O14896 467 aa16.11■□□□□ 0.17
CAPN1-209ENST00000527469 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
CAPN1-209ENST00000527469 TNS4Q8IZW8 715 aa16.11■□□□□ 0.17
CAPN1-209ENST00000527469 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
CAPN1-209ENST00000527469 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
CAPN1-209ENST00000527469 ZHX2Q9Y6X8 837 aa16.11■□□□□ 0.17
CAPN1-209ENST00000527469 SLURP2P0DP57 97 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 PDE1AP54750 535 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 NUCB1Q02818 461 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 SLFNL1Q499Z3 407 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 SDR42E1Q8WUS8 393 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CAPN1-209ENST00000527469 TESPA1A2RU30 521 aaPredicted RBP16.09■□□□□ 0.17
CAPN1-209ENST00000527469 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
CAPN1-209ENST00000527469 PTPRAP18433 802 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 MS4A4AQ96JQ5 239 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 CDK5RAP2Q96SN8 1893 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 MYH7P12883 1935 aa16.09■□□□□ 0.17
CAPN1-209ENST00000527469 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
CAPN1-209ENST00000527469 TRIM6-TRIM34B2RNG4 842 aa16.08■□□□□ 0.16
CAPN1-209ENST00000527469 CXCL11O14625 94 aa16.08■□□□□ 0.16
CAPN1-209ENST00000527469 CAP2P40123 477 aa16.08■□□□□ 0.16
CAPN1-209ENST00000527469 PUS7LQ9H0K6 701 aaKnown RBP16.08■□□□□ 0.16
CAPN1-209ENST00000527469 EHD4Q9H223 541 aa16.08■□□□□ 0.16
CAPN1-209ENST00000527469 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
CAPN1-209ENST00000527469 MYH1P12882 1939 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 PRKAB2O43741 272 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 CHGBP05060 677 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 TAF1CQ15572 869 aaPredicted RBP16.07■□□□□ 0.16
CAPN1-209ENST00000527469 FASTKD5Q7L8L6 764 aaKnown RBP16.07■□□□□ 0.16
CAPN1-209ENST00000527469 EVI5LQ96CN4 794 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 PTPN18Q99952 460 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 ZFYVE28Q9HCC9 887 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 SALL3Q9BXA9 1300 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 DOCK1Q14185 1865 aa16.07■□□□□ 0.16
CAPN1-209ENST00000527469 NAV1Q8NEY1 1877 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GPR25O00155 361 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GDF11O95390 407 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 APPP05067 770 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 ASNSP08243 561 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GNAT2P19087 354 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 CRHR2Q13324 411 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GADL1Q6ZQY3 521 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 CFHR5Q9BXR6 569 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GINM1Q9NU53 330 aa16.06■□□□□ 0.16
CAPN1-209ENST00000527469 GPAA1O43292 621 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 PLCD1P51178 756 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 CERKLQ49MI3 558 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 CCDC84Q86UT8 332 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 METTL16Q86W50 562 aaKnown RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 FAM43AQ8N2R8 423 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 ZNF280CQ8ND82 737 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 ZNF296Q8WUU4 475 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 ZCCHC17Q9NP64 241 aaKnown RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
CAPN1-209ENST00000527469 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
CAPN1-209ENST00000527469 CASP8AP2Q9UKL3 1982 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 BTBD19C9JJ37 291 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 MPHOSPH10O00566 681 aaKnown RBP16.04■□□□□ 0.16
CAPN1-209ENST00000527469 FKTNO75072 461 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 NEFLP07196 543 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 TDO2P48775 406 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 SPP2Q13103 211 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 ANKRD23Q86SG2 305 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 OSBP2Q969R2 916 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 STRBPQ96SI9 672 aaKnown RBP16.04■□□□□ 0.16
CAPN1-209ENST00000527469 NACAP1Q9BZK3 213 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 DNAJC18Q9H819 358 aa16.04■□□□□ 0.16
CAPN1-209ENST00000527469 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms