RNA–Protein interactions for RNA: ENST00000527205.1

TTC39A-215, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 4

Gene TTC39A, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-215ENST00000527205 SDR42E1Q8WUS8 393 aa23.49■■□□□ 1.35
TTC39A-215ENST00000527205 TBC1D12O60347 775 aa23.48■■□□□ 1.35
TTC39A-215ENST00000527205 TM4SF4P48230 202 aa23.48■■□□□ 1.35
TTC39A-215ENST00000527205 CERS3Q8IU89 383 aa23.48■■□□□ 1.35
TTC39A-215ENST00000527205 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.48■■□□□ 1.35
TTC39A-215ENST00000527205 RNF186Q9NXI6 227 aa23.48■■□□□ 1.35
TTC39A-215ENST00000527205 CTCFP49711 727 aaPredicted RBP23.47■■□□□ 1.35
TTC39A-215ENST00000527205 LBX1P52954 281 aa23.47■■□□□ 1.35
TTC39A-215ENST00000527205 PLEKHM2Q8IWE5 1019 aa23.47■■□□□ 1.35
TTC39A-215ENST00000527205 CRNKL1Q9BZJ0 848 aaKnown RBP23.47■■□□□ 1.35
TTC39A-215ENST00000527205 IGF2BP3O00425 579 aaKnown RBP eCLIP23.46■■□□□ 1.35
TTC39A-215ENST00000527205 RNF113AO15541 343 aaKnown RBP23.46■■□□□ 1.35
TTC39A-215ENST00000527205 PDE4AP27815 886 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 ZSCAN25Q6NSZ9 544 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 CCDC84Q86UT8 332 aaPredicted RBP23.46■■□□□ 1.35
TTC39A-215ENST00000527205 ERO1BQ86YB8 467 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 OSBP2Q969R2 916 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 MS4A4AQ96JQ5 239 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
TTC39A-215ENST00000527205 DHX36Q9H2U1 1008 aaKnown RBP23.46■■□□□ 1.35
TTC39A-215ENST00000527205 MANSC4A6NHS7 340 aaPredicted RBP23.45■■□□□ 1.34
TTC39A-215ENST00000527205 M0R2C6 588 aa23.45■■□□□ 1.34
TTC39A-215ENST00000527205 TRPA1O75762 1119 aa23.45■■□□□ 1.34
TTC39A-215ENST00000527205 SHROOM1Q2M3G4 852 aaPredicted RBP23.45■■□□□ 1.34
TTC39A-215ENST00000527205 SCYL3Q8IZE3 742 aa23.45■■□□□ 1.34
TTC39A-215ENST00000527205 FSD1Q9BTV5 496 aa23.45■■□□□ 1.34
TTC39A-215ENST00000527205 DCP1AQ9NPI6 582 aaPredicted RBP23.45■■□□□ 1.34
TTC39A-215ENST00000527205 PI4KBQ9UBF8 816 aa23.45■■□□□ 1.34
TTC39A-215ENST00000527205 IRF6O14896 467 aa23.44■■□□□ 1.34
TTC39A-215ENST00000527205 SREBF2Q12772 1141 aa23.44■■□□□ 1.34
TTC39A-215ENST00000527205 PPIL2Q13356 520 aa23.44■■□□□ 1.34
TTC39A-215ENST00000527205 METTL16Q86W50 562 aaKnown RBP23.44■■□□□ 1.34
TTC39A-215ENST00000527205 REM2Q8IYK8 340 aaPredicted RBP23.44■■□□□ 1.34
TTC39A-215ENST00000527205 APPBP2Q92624 585 aa23.44■■□□□ 1.34
TTC39A-215ENST00000527205 SEC62Q99442 399 aaKnown RBP23.44■■□□□ 1.34
TTC39A-215ENST00000527205 PTPN18Q99952 460 aa23.44■■□□□ 1.34
TTC39A-215ENST00000527205 LOC285556D6RIA3 1793 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 CYP2D6P10635 497 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 PLCD1P51178 756 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 JAG1P78504 1218 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 BRI3BPQ8WY22 251 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 SAGE1Q9NXZ1 904 aa23.43■■□□□ 1.34
TTC39A-215ENST00000527205 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
TTC39A-215ENST00000527205 TESPA1A2RU30 521 aaPredicted RBP23.42■■□□□ 1.34
TTC39A-215ENST00000527205 SMIM22K7EJ46 135 aa23.42■■□□□ 1.34
TTC39A-215ENST00000527205 HLA-DOAP06340 250 aa23.42■■□□□ 1.34
TTC39A-215ENST00000527205 PPATQ06203 517 aa23.42■■□□□ 1.34
TTC39A-215ENST00000527205 COL13A1Q5TAT6 717 aaPredicted RBP23.42■■□□□ 1.34
TTC39A-215ENST00000527205 IFNL1Q8IU54 200 aa23.42■■□□□ 1.34
TTC39A-215ENST00000527205 R3HDMLQ9H3Y0 253 aa23.42■■□□□ 1.34
TTC39A-215ENST00000527205 CCL15-CCL14A0A0B4J2E2 113 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 CA12O43570 354 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 CTNND1O60716 968 aaKnown RBP23.41■■□□□ 1.34
TTC39A-215ENST00000527205 PTPRAP18433 802 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 CCL15Q16663 113 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 STRBPQ96SI9 672 aaKnown RBP23.41■■□□□ 1.34
TTC39A-215ENST00000527205 OSBPL3Q9H4L5 887 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 MCM9Q9NXL9 1143 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 SLC4A4Q9Y6R1 1079 aa23.41■■□□□ 1.34
TTC39A-215ENST00000527205 TBC1D8O95759 1140 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 ZFYP08048 801 aaPredicted RBP23.4■■□□□ 1.34
TTC39A-215ENST00000527205 CAP2P40123 477 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 GTF2A2P52657 109 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 ZMYM1Q5SVZ6 1142 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 FOXP4Q8IVH2 680 aaPredicted RBP23.4■■□□□ 1.34
TTC39A-215ENST00000527205 CRACR2BQ8N4Y2 399 aaPredicted RBP23.4■■□□□ 1.34
TTC39A-215ENST00000527205 EVI5LQ96CN4 794 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 KCNH4Q9UQ05 1017 aa23.4■■□□□ 1.34
TTC39A-215ENST00000527205 CYP2D7A0A087X1C5 515 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 GPAA1O43292 621 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 GDF11O95390 407 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 EHD4Q9H223 541 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 PRDM10Q9NQV6 1147 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 PICK1Q9NRD5 415 aa23.39■■□□□ 1.33
TTC39A-215ENST00000527205 ZSWIM8A7E2V4 1837 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 POLR3DP05423 398 aaPredicted RBP23.38■■□□□ 1.33
TTC39A-215ENST00000527205 GABPAQ06546 454 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 MOGSQ13724 837 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 FAM43AQ8N2R8 423 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 EPB41L4AQ9HCS5 686 aaPredicted RBP23.38■■□□□ 1.33
TTC39A-215ENST00000527205 ATP8A2Q9NTI2 1148 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 SERPINB13Q9UIV8 391 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 ZHX2Q9Y6X8 837 aa23.38■■□□□ 1.33
TTC39A-215ENST00000527205 GSG1L2A8MUP6 293 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 SHMT1P34896 483 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 INHBEP58166 350 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 SNAPC2Q13487 334 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 CCDC129Q6ZRS4 1044 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 TTC6Q86TZ1 520 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 TRIM34Q9BYJ4 488 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 AFG3L2Q9Y4W6 797 aa23.37■■□□□ 1.33
TTC39A-215ENST00000527205 GREB1LQ9C091 1923 aaPredicted RBP23.36■■□□□ 1.33
TTC39A-215ENST00000527205 TRIM6-TRIM34B2RNG4 842 aa23.36■■□□□ 1.33
TTC39A-215ENST00000527205 SLC44A5Q8NCS7 719 aa23.36■■□□□ 1.33
TTC39A-215ENST00000527205 DYNLL2Q96FJ2 89 aa23.36■■□□□ 1.33
TTC39A-215ENST00000527205 BTBD19C9JJ37 291 aa23.35■■□□□ 1.33
TTC39A-215ENST00000527205 CETPP11597 493 aa23.35■■□□□ 1.33
TTC39A-215ENST00000527205 TATDN1Q6P1N9 297 aa23.35■■□□□ 1.33
TTC39A-215ENST00000527205 RILPL2Q969X0 211 aa23.35■■□□□ 1.33
TTC39A-215ENST00000527205 A0A0D9SFI3 127 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms