RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 NBPF4Q96M43 638 aa7.63□□□□□ -1.19
SF3B2-205ENST00000526653 CCDC87Q9NVE4 849 aa7.63□□□□□ -1.19
SF3B2-205ENST00000526653 ITSN1Q15811 1721 aa7.63□□□□□ -1.19
SF3B2-205ENST00000526653 ARHGEF28Q8N1W1 1705 aaKnown RBP7.63□□□□□ -1.19
SF3B2-205ENST00000526653 PXDNLA1KZ92 1463 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 RGPD5Q99666 1765 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 LOC102724428A0A0B4J2F2 783 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 GLTPD2A6NH11 291 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 ZBTB42B2RXF5 422 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 SASH3O75995 380 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 RFX1P22670 979 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 CHRNA5P30532 468 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 AMPHP49418 695 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 SIK1P57059 783 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 ADGRE1Q14246 886 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 MBTPS1Q14703 1052 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 SHISA2Q6UWI4 295 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
SF3B2-205ENST00000526653 TMC1Q8TDI8 760 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 RAPGEF4Q8WZA2 1011 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 LPIN3Q9BQK8 851 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 TRPM1Q7Z4N2 1603 aa7.62□□□□□ -1.19
SF3B2-205ENST00000526653 OPLAHO14841 1288 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 DYRK3O43781 588 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 RARAP10276 462 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 RGS19P49795 217 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 FKBP5Q13451 457 aaPredicted RBP7.61□□□□□ -1.19
SF3B2-205ENST00000526653 ITPK1Q13572 414 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 PCSK7Q16549 785 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 PERM1Q5SV97 790 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 ZMYM1Q5SVZ6 1142 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 FMR1NBQ8N0W7 255 aaPredicted RBP7.61□□□□□ -1.19
SF3B2-205ENST00000526653 TRPM4Q8TD43 1214 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 LENG1Q96BZ8 264 aaPredicted RBP7.61□□□□□ -1.19
SF3B2-205ENST00000526653 C11orf16Q9NQ32 467 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 NOVA2Q9UNW9 492 aaKnown RBP7.61□□□□□ -1.19
SF3B2-205ENST00000526653 USP20Q9Y2K6 914 aa7.61□□□□□ -1.19
SF3B2-205ENST00000526653 PLEKHG2Q9H7P9 1386 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 HOXC9P31274 260 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 PLAURQ03405 335 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 GRIK5Q16478 980 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 TXNRD3Q86VQ6 643 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 SLC12A5Q9H2X9 1139 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 FRRS1LQ9P0K9 344 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 ASAP1Q9ULH1 1129 aa7.6□□□□□ -1.19
SF3B2-205ENST00000526653 RTCBQ9Y3I0 505 aaKnown RBP7.6□□□□□ -1.19
SF3B2-205ENST00000526653 USP31Q70CQ4 1352 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 QSER1Q2KHR3 1735 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 CYP27B1O15528 508 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 GYS1P13807 737 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 RFC4P35249 363 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 GPLD1P80108 840 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 COX20Q5RI15 118 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 ELMSAN1Q6PJG2 1045 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 TREML1Q86YW5 311 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 PRIMPOLQ96LW4 560 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.59□□□□□ -1.196e-6■■■■■ 48.1
SF3B2-205ENST00000526653 TUBGCP6Q96RT7 1819 aa7.59□□□□□ -1.19
SF3B2-205ENST00000526653 NFAT5O94916 1531 aa7.58□□□□□ -1.2
SF3B2-205ENST00000526653 PIK3C2AO00443 1686 aa7.58□□□□□ -1.2
SF3B2-205ENST00000526653 WNK3Q9BYP7 1800 aa7.58□□□□□ -1.2
SF3B2-205ENST00000526653 HSPA8P11142 646 aaKnown RBP7.58□□□□□ -1.2
SF3B2-205ENST00000526653 LMNB1P20700 586 aa7.58□□□□□ -1.2
SF3B2-205ENST00000526653 NRG1Q02297 640 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-205ENST00000526653 FOXD4L6Q3SYB3 417 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-205ENST00000526653 FOXD4L3Q6VB84 417 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-205ENST00000526653 HDGFL2Q7Z4V5 671 aaPredicted RBP7.58□□□□□ -1.2
SF3B2-205ENST00000526653 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
SF3B2-205ENST00000526653 MAP3K19Q56UN5 1328 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 PRMT3O60678 531 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 XYLBO75191 536 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 EGFRP00533 1210 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 SWI5Q1ZZU3 235 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 HFE2Q6ZVN8 426 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 CMTR1Q8N1G2 835 aaKnown RBP7.57□□□□□ -1.2
SF3B2-205ENST00000526653 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
SF3B2-205ENST00000526653 CGNL1Q0VF96 1302 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 C10orf71Q711Q0 1435 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 NRLP54845 237 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 RRS1Q15050 365 aaKnown RBP7.56□□□□□ -1.2
SF3B2-205ENST00000526653 OCLNQ16625 522 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 PRSS36Q5K4E3 855 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 WFDC8Q8IUA0 241 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 DTWD1Q8N5C7 304 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 TTC9Q92623 222 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 COG3Q96JB2 828 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 SMG9Q9H0W8 520 aaKnown RBP7.56□□□□□ -1.2
SF3B2-205ENST00000526653 ATG3Q9NT62 314 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
SF3B2-205ENST00000526653 TMOD3Q9NYL9 352 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 CNTNAP1P78357 1384 aa7.56□□□□□ -1.2
SF3B2-205ENST00000526653 PCDH11XQ9BZA7 1347 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 PCDH11YQ9BZA8 1340 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 NSD3Q9BZ95 1437 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 TMEM88BA6NKF7 163 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 RPS6KA4O75676 772 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 DDNO94850 711 aaPredicted RBP7.55□□□□□ -1.2
SF3B2-205ENST00000526653 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
SF3B2-205ENST00000526653 H2AFB2P0C5Z0 115 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms