RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 OTUD5Q96G74 571 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 TSKSQ9UJT2 592 aa19.57■□□□□ 0.72
SSSCA1-202ENST00000526433 CTNND1O60716 968 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-202ENST00000526433 ZFYP08048 801 aaPredicted RBP19.56■□□□□ 0.72
SSSCA1-202ENST00000526433 LBX1P52954 281 aa19.56■□□□□ 0.72
SSSCA1-202ENST00000526433 PUS7LQ9H0K6 701 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-202ENST00000526433 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
SSSCA1-202ENST00000526433 PRKAB2O43741 272 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 HLA-DOAP06340 250 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 PPATQ06203 517 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 SLC4A8Q2Y0W8 1093 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 LRRFIP1Q32MZ4 808 aaKnown RBP19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 METTL16Q86W50 562 aaKnown RBP19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 PLEKHM2Q8IWE5 1019 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 SCYL3Q8IZE3 742 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 SDR42E1Q8WUS8 393 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 MS4A4AQ96JQ5 239 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 FSD1Q9BTV5 496 aa19.55■□□□□ 0.72
SSSCA1-202ENST00000526433 IRF6O14896 467 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 GTF2A2P52657 109 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 PPIL2Q13356 520 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 TTC6Q86TZ1 520 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 CRACR2BQ8N4Y2 399 aaPredicted RBP19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 APPBP2Q92624 585 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 PICK1Q9NRD5 415 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 SAGE1Q9NXZ1 904 aa19.54■□□□□ 0.72
SSSCA1-202ENST00000526433 TESPA1A2RU30 521 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 POLR3DP05423 398 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 RRP1BQ14684 758 aaKnown RBP19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 IFNL1Q8IU54 200 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 STRBPQ96SI9 672 aaKnown RBP19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 TRIM34Q9BYJ4 488 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 OSBPL3Q9H4L5 887 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 DCP1AQ9NPI6 582 aaPredicted RBP19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 PRDM10Q9NQV6 1147 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 ATP8A2Q9NTI2 1148 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 MCM9Q9NXL9 1143 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 SIPA1L1O43166 1804 aa19.53■□□□□ 0.72
SSSCA1-202ENST00000526433 PTPRAP18433 802 aa19.52■□□□□ 0.72
SSSCA1-202ENST00000526433 PTPN18Q99952 460 aa19.52■□□□□ 0.72
SSSCA1-202ENST00000526433 DNAJC18Q9H819 358 aa19.52■□□□□ 0.72
SSSCA1-202ENST00000526433 SLC4A4Q9Y6R1 1079 aa19.52■□□□□ 0.72
SSSCA1-202ENST00000526433 ZHX2Q9Y6X8 837 aa19.52■□□□□ 0.72
SSSCA1-202ENST00000526433 CCL15-CCL14A0A0B4J2E2 113 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 IGF2BP3O00425 579 aaKnown RBP eCLIP19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 CAP2P40123 477 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 PLCD1P51178 756 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 SNAPC2Q13487 334 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 CCL15Q16663 113 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 OTUD7BQ6GQQ9 843 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 BRI3BPQ8WY22 251 aa19.51■□□□□ 0.71
SSSCA1-202ENST00000526433 TRIM6-TRIM34B2RNG4 842 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 TBC1D8O95759 1140 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 ALDH1A1P00352 501 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 CETPP11597 493 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 PDE4AP27815 886 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 SEC62Q99442 399 aaKnown RBP19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 EHD4Q9H223 541 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 SERPINB13Q9UIV8 391 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 KCNH4Q9UQ05 1017 aa19.5■□□□□ 0.71
SSSCA1-202ENST00000526433 LAMB1P07942 1786 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 BAZ2AQ9UIF9 1905 aaKnown RBP19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 M0R2C6 588 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 CXCL11O14625 94 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 CYP2D6P10635 497 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 ZMYM1Q5SVZ6 1142 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 COL13A1Q5TAT6 717 aaPredicted RBP19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 AFG3L2Q9Y4W6 797 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 CASP8AP2Q9UKL3 1982 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 NAV1Q8NEY1 1877 aa19.49■□□□□ 0.71
SSSCA1-202ENST00000526433 DOCK1Q14185 1865 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 GPAA1O43292 621 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 JAG1P78504 1218 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 EVX2Q03828 476 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 TATDN1Q6P1N9 297 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 CCDC84Q86UT8 332 aaPredicted RBP19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 RILPL2Q969X0 211 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 DDRGK1Q96HY6 314 aa19.48■□□□□ 0.71
SSSCA1-202ENST00000526433 GSG1L2A8MUP6 293 aa19.47■□□□□ 0.71
SSSCA1-202ENST00000526433 USP17L12C9JPN9 530 aa19.47■□□□□ 0.71
SSSCA1-202ENST00000526433 USP17L21D6R901 530 aa19.47■□□□□ 0.71
SSSCA1-202ENST00000526433 TICAM2Q86XR7 235 aa19.47■□□□□ 0.71
SSSCA1-202ENST00000526433 R3HDMLQ9H3Y0 253 aa19.47■□□□□ 0.71
SSSCA1-202ENST00000526433 ATAD5Q96QE3 1844 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 USP17L5A8MUK1 530 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 PATL2C9JE40 543 aaKnown RBP19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 GDF11O95390 407 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 ASNSP08243 561 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 GNAT2P19087 354 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 GABPAQ06546 454 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 C12orf60Q5U649 245 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 FAM43AQ8N2R8 423 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 CFHR5Q9BXR6 569 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 GINM1Q9NU53 330 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 PHIPQ8WWQ0 1821 aa19.46■□□□□ 0.71
SSSCA1-202ENST00000526433 BTBD19C9JJ37 291 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms