RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 RFC5P40937 340 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 GTF2A2P52657 109 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 RBM5P52756 815 aaKnown RBP eCLIP9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 CHRNDQ07001 517 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 KIF22Q14807 665 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 CCL15Q16663 113 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 CCDC30Q5VVM6 783 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 KSR2Q6VAB6 950 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 PI4KAP1Q8N8J0 262 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 SLC17A8Q8NDX2 589 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 SH3TC2Q8TF17 1288 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 BRI3BPQ8WY22 251 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 DPF3Q92784 378 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 ZNF646O15015 1829 aaPredicted RBP9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 CEP290O15078 2479 aa9.54□□□□□ -0.88
CLNS1A-205ENST00000526009 JUNDP17535 347 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 FKBP1AP62942 108 aaKnown RBP9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 GNAI1P63096 354 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 TNFAIP1Q13829 316 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 WDR43Q15061 677 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 CWF19L2Q2TBE0 894 aaKnown RBP9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 UBE3BQ7Z3V4 1068 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 FAM43AQ8N2R8 423 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 C8orf58Q8NAV2 365 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 IFT57Q9NWB7 429 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 LAMA3Q16787 3333 aa9.53□□□□□ -0.88
CLNS1A-205ENST00000526009 NEURL1BA8MQ27 555 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 H7C1W4 665 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 SNAP23O00161 211 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 TLR2O60603 784 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 GNRH1P01148 92 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 IL1R1P14778 569 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 PRMT2P55345 433 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 CALD1Q05682 793 aaKnown RBP9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 C15orf52Q6ZUT6 534 aaKnown RBP9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 PLA2G12BQ9BX93 195 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 LAMB1P07942 1786 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 COL6A3P12111 3177 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 AOX1Q06278 1338 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 A0A0C4DFX4 3053 aa9.52□□□□□ -0.89
CLNS1A-205ENST00000526009 TAF5LO75529 589 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 CSF1RP07333 972 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 LACTBP83111 547 aaPredicted RBP9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 CTDSPL2Q05D32 466 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 VGLL4Q14135 290 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 HTATIP2Q9BUP3 242 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 ARHGAP39Q9C0H5 1083 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 ZNF70Q9UC06 446 aaPredicted RBP9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 JAG2Q9Y219 1238 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 CSADQ9Y600 493 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 IRS2Q9Y4H2 1338 aa9.51□□□□□ -0.89
CLNS1A-205ENST00000526009 ANKRD18BA2A2Z9 1011 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 RNF223E7ERA6 249 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 TNNI2P48788 182 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 MMP16P51512 607 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 GCKRQ14397 625 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 MTFR1Q15390 333 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 DESI1Q6ICB0 168 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.5□□□□□ -0.893e-7■■■■□ 21.4
CLNS1A-205ENST00000526009 SHISA4Q96DD7 197 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 TEPSINQ96N21 525 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 STK31Q9BXU1 1019 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 TDRD3Q9H7E2 651 aaKnown RBP9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 ZCCHC17Q9NP64 241 aaKnown RBP9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 TTF2Q9UNY4 1162 aaKnown RBP9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 NR2E3Q9Y5X4 410 aa9.5□□□□□ -0.89
CLNS1A-205ENST00000526009 SPEF2Q9C093 1822 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 MYH3P11055 1940 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 TCP10L2B9ZVM9 353 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 CETPP11597 493 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 HOXD10P28358 340 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 DZIP1LQ8IYY4 767 aaKnown RBP9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 PRO3102Q9H379 93 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 MYH16Q9H6N6 1097 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 SERPINA10Q9UK55 444 aa9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 FCF1Q9Y324 198 aaKnown RBP9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 MYBBP1AQ9BQG0 1328 aaKnown RBP9.49□□□□□ -0.89
CLNS1A-205ENST00000526009 ECM29Q5VYK3 1845 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 BTBD19C9JJ37 291 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 APAF1O14727 1248 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 GJB1P08034 283 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 GRK4P32298 578 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 GJA8P48165 433 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 CASP7P55210 303 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 IFIT5Q13325 482 aaKnown RBP9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 SNAPC2Q13487 334 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 MFSD14BQ5SR56 506 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 ERO1BQ86YB8 467 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 TSPYL6Q8N831 410 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 RAET1EQ8TD07 263 aa9.48□□□□□ -0.89
CLNS1A-205ENST00000526009 NUDT12Q9BQG2 462 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms