RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 DYNLL1P63167 89 aaKnown RBP12.75□□□□□ -0.37
RBBP4-216ENST00000525506 RRP1BQ14684 758 aaKnown RBP12.75□□□□□ -0.37
RBBP4-216ENST00000525506 TGFBRAP1Q8WUH2 860 aa12.75□□□□□ -0.37
RBBP4-216ENST00000525506 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
RBBP4-216ENST00000525506 LRRCC1Q9C099 1032 aa12.75□□□□□ -0.37
RBBP4-216ENST00000525506 CPA4Q9UI42 421 aa12.75□□□□□ -0.37
RBBP4-216ENST00000525506 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
RBBP4-216ENST00000525506 CTNND1O60716 968 aaKnown RBP12.74□□□□□ -0.37
RBBP4-216ENST00000525506 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
RBBP4-216ENST00000525506 IDH1O75874 414 aaKnown RBP12.74□□□□□ -0.37
RBBP4-216ENST00000525506 IFIT2P09913 472 aaKnown RBP12.74□□□□□ -0.37
RBBP4-216ENST00000525506 CYP7A1P22680 504 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 GPAT2Q6NUI2 795 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 CERS3Q8IU89 383 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 MAPKAPK5Q8IW41 473 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 ZCCHC17Q9NP64 241 aaKnown RBP12.74□□□□□ -0.37
RBBP4-216ENST00000525506 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 DOCK3Q8IZD9 2030 aa12.74□□□□□ -0.37
RBBP4-216ENST00000525506 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
RBBP4-216ENST00000525506 TRIM75PA6NK02 468 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 CXCL11O14625 94 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 TBC1D12O60347 775 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 BAG3O95817 575 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 CYP2C8P10632 490 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 CTGFP29279 349 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 PPP4CP60510 307 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 TTF1Q15361 905 aaPredicted RBP12.73□□□□□ -0.37
RBBP4-216ENST00000525506 C17orf99Q6UX52 265 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 MAGEB6Q8N7X4 407 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 MIGA1Q8NAN2 632 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 CRBNQ96SW2 442 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 SAP30BPQ9UHR5 308 aaKnown RBP12.73□□□□□ -0.37
RBBP4-216ENST00000525506 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 PTCH2Q9Y6C5 1203 aa12.73□□□□□ -0.37
RBBP4-216ENST00000525506 ADGRA2Q96PE1 1338 aa12.72□□□□□ -0.37
RBBP4-216ENST00000525506 A0A0G2JLL6 359 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-216ENST00000525506 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
RBBP4-216ENST00000525506 LACTBP83111 547 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-216ENST00000525506 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-216ENST00000525506 SHROOM1Q2M3G4 852 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-216ENST00000525506 PRRT2Q7Z6L0 340 aaPredicted RBP12.72□□□□□ -0.37
RBBP4-216ENST00000525506 PALD1Q9ULE6 856 aa12.72□□□□□ -0.37
RBBP4-216ENST00000525506 FLT1P17948 1338 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
RBBP4-216ENST00000525506 PLCG2P16885 1265 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 ATP5JP18859 108 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 JAG1P78504 1218 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 KIF22Q14807 665 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 DNAJC18Q9H819 358 aa12.71□□□□□ -0.37
RBBP4-216ENST00000525506 CAP2P40123 477 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 PSMC4P43686 418 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 MAP3K12Q12852 859 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 SPP2Q13103 211 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 FASTKD5Q7L8L6 764 aaKnown RBP12.7□□□□□ -0.38
RBBP4-216ENST00000525506 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 EDC3Q96F86 508 aaKnown RBP12.7□□□□□ -0.38
RBBP4-216ENST00000525506 TRIM47Q96LD4 638 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 DNAJC2Q99543 621 aaKnown RBP12.7□□□□□ -0.38
RBBP4-216ENST00000525506 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 LOC285556D6RIA3 1793 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
RBBP4-216ENST00000525506 MYH7P12883 1935 aa12.7□□□□□ -0.38
RBBP4-216ENST00000525506 SMARCA5O60264 1052 aaPredicted RBP12.69□□□□□ -0.38
RBBP4-216ENST00000525506 GDF11O95390 407 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 USP5P45974 858 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 ARHGEF6Q15052 776 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 SLFNL1Q499Z3 407 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 SLC9C1Q4G0N8 1177 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 TREML2Q5T2D2 321 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
RBBP4-216ENST00000525506 SH3TC2Q8TF17 1288 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 ARMC5Q96C12 935 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 PARK7Q99497 189 aaKnown RBP12.69□□□□□ -0.38
RBBP4-216ENST00000525506 DHX36Q9H2U1 1008 aaKnown RBP12.69□□□□□ -0.38
RBBP4-216ENST00000525506 HERC5Q9UII4 1024 aaKnown RBP12.69□□□□□ -0.38
RBBP4-216ENST00000525506 NAV1Q8NEY1 1877 aa12.69□□□□□ -0.38
RBBP4-216ENST00000525506 BAZ2AQ9UIF9 1905 aaKnown RBP12.68□□□□□ -0.38
RBBP4-216ENST00000525506 GOLIM4O00461 696 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 FMNL1O95466 1100 aaPredicted RBP12.68□□□□□ -0.38
RBBP4-216ENST00000525506 BCRP11274 1271 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 EN2P19622 333 aaPredicted RBP12.68□□□□□ -0.38
RBBP4-216ENST00000525506 HMGCS2P54868 508 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 HAUS7Q99871 368 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 BOLA2Q9H3K6 86 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 ECHDC1Q9NTX5 307 aa12.68□□□□□ -0.38
RBBP4-216ENST00000525506 TTC41PQ6P2S7 1318 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 USP17L5A8MUK1 530 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 PDE6AP16499 860 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 OSBPP22059 807 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 SLC9C2Q5TAH2 1124 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 METTL16Q86W50 562 aaKnown RBP12.67□□□□□ -0.38
RBBP4-216ENST00000525506 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
RBBP4-216ENST00000525506 ZNF280CQ8ND82 737 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 ZNF333Q96JL9 665 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 AGTPBP1Q9UPW5 1226 aa12.67□□□□□ -0.38
RBBP4-216ENST00000525506 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms