RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 HTTP42858 3142 aa15.32■□□□□ 0.04
SMCO4-202ENST00000525141 TGFBRAP1Q8WUH2 860 aa15.32■□□□□ 0.04
SMCO4-202ENST00000525141 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMCO4-202ENST00000525141 CPA4Q9UI42 421 aa15.32■□□□□ 0.04
SMCO4-202ENST00000525141 SUPT16HQ9Y5B9 1047 aaKnown RBP15.32■□□□□ 0.04
SMCO4-202ENST00000525141 PHIPQ8WWQ0 1821 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 A0A0G2JLL6 359 aaPredicted RBP15.31■□□□□ 0.04
SMCO4-202ENST00000525141 HMMRO75330 724 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 CYP7A1P22680 504 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 AAMPQ13685 434 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 PRRT2Q7Z6L0 340 aaPredicted RBP15.31■□□□□ 0.04
SMCO4-202ENST00000525141 METTL16Q86W50 562 aaKnown RBP15.31■□□□□ 0.04
SMCO4-202ENST00000525141 ERC1Q8IUD2 1116 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 MAPKAPK5Q8IW41 473 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 DOCK2Q92608 1830 aa15.31■□□□□ 0.04
SMCO4-202ENST00000525141 ZSWIM8A7E2V4 1837 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 APBB1O00213 710 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 IGSF3O75054 1194 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 BAG3O95817 575 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 CYP2C8P10632 490 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 CAP2P40123 477 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 LACTBP83111 547 aaPredicted RBP15.3■□□□□ 0.04
SMCO4-202ENST00000525141 DNAJC18Q9H819 358 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 PI4KBQ9UBF8 816 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
SMCO4-202ENST00000525141 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 COL2A1P02458 1487 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-202ENST00000525141 POTEFA5A3E0 1075 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 SHROOM1Q2M3G4 852 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-202ENST00000525141 HSP90AB4PQ58FF6 505 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 FOXP4Q8IVH2 680 aaPredicted RBP15.29■□□□□ 0.04
SMCO4-202ENST00000525141 MAGEB6Q8N7X4 407 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 ARMC5Q96C12 935 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 PTCH2Q9Y6C5 1203 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 SIPA1L1O43166 1804 aa15.29■□□□□ 0.04
SMCO4-202ENST00000525141 FLT1P17948 1338 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 RAB11FIP3O75154 756 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 IDH1O75874 414 aaKnown RBP15.28■□□□□ 0.04
SMCO4-202ENST00000525141 ECM2O94769 699 aaPredicted RBP15.28■□□□□ 0.04
SMCO4-202ENST00000525141 BCRP11274 1271 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 SPP2Q13103 211 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 FASTKD5Q7L8L6 764 aaKnown RBP15.28■□□□□ 0.04
SMCO4-202ENST00000525141 MIGA1Q8NAN2 632 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 KIF1BPQ96EK5 621 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 CRBNQ96SW2 442 aa15.28■□□□□ 0.04
SMCO4-202ENST00000525141 DHX36Q9H2U1 1008 aaKnown RBP15.28■□□□□ 0.04
SMCO4-202ENST00000525141 KIAA0100Q14667 2235 aaKnown RBP15.28■□□□□ 0.04
SMCO4-202ENST00000525141 TRIM75PA6NK02 468 aa15.27■□□□□ 0.04
SMCO4-202ENST00000525141 PLCG2P16885 1265 aa15.27■□□□□ 0.04
SMCO4-202ENST00000525141 TREML2Q5T2D2 321 aa15.27■□□□□ 0.04
SMCO4-202ENST00000525141 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 EDC3Q96F86 508 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
SMCO4-202ENST00000525141 RIOK1Q9BRS2 568 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 NOL10Q9BSC4 688 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 HERC5Q9UII4 1024 aaKnown RBP15.27■□□□□ 0.04
SMCO4-202ENST00000525141 PTPRFP10586 1907 aa15.27■□□□□ 0.03
SMCO4-202ENST00000525141 TCRBV5S4A2TA0A5A2 114 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 PSMC4P43686 418 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 SLFNL1Q499Z3 407 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 GADL1Q6ZQY3 521 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMCO4-202ENST00000525141 SLC45A1Q9Y2W3 748 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 CENPFP49454 3210 aa15.26■□□□□ 0.03
SMCO4-202ENST00000525141 DOCK1Q14185 1865 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 USP17L5A8MUK1 530 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 SMARCA5O60264 1052 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-202ENST00000525141 CHGBP05060 677 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 MAP3K12Q12852 859 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 SH3D19Q5HYK7 790 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 ZNF280CQ8ND82 737 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 ZNF333Q96JL9 665 aa15.25■□□□□ 0.03
SMCO4-202ENST00000525141 FOCADQ5VW36 1801 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
SMCO4-202ENST00000525141 EN2P19622 333 aaPredicted RBP15.24■□□□□ 0.03
SMCO4-202ENST00000525141 OSBPP22059 807 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 EVX2Q03828 476 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 ARHGEF6Q15052 776 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 SLC4A8Q2Y0W8 1093 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 WDR18Q9BV38 432 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 BCL11AQ9H165 835 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 BOLA2Q9H3K6 86 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 AGTPBP1Q9UPW5 1226 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 PDE4DIPQ5VU43 2346 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 DOCK3Q8IZD9 2030 aa15.24■□□□□ 0.03
SMCO4-202ENST00000525141 GOLIM4O00461 696 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 GNRH1P01148 92 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 PDE6AP16499 860 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 ATP5JP18859 108 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 PLCD1P51178 756 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 KIF22Q14807 665 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 SLC9C2Q5TAH2 1124 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 SH3TC2Q8TF17 1288 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 PARK7Q99497 189 aaKnown RBP15.23■□□□□ 0.03
SMCO4-202ENST00000525141 DCTPP1Q9H773 170 aa15.23■□□□□ 0.03
SMCO4-202ENST00000525141 SRRDQ9UH36 339 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms